RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 YWHABP31946 246 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ACSL1P33121 698 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 MCM4P33991 863 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PPOXP50336 477 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ARSFP54793 590 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TAS2R38P59533 333 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 YWHAEP62258 255 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 RBP5P82980 135 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EHHADHQ08426 723 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ACSM1Q08AH1 577 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EFNB3Q15768 340 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EXT1Q16394 746 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 IMMTQ16891 758 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 WSCD2Q2TBF2 565 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 C10orf76Q5T2E6 689 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 L1TD1Q5T7N2 865 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TAF3Q5VWG9 929 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 RHBDD2Q6NTF9 364 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 KLHL35Q6PF15 583 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CHST15Q7LFX5 561 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PLA2G4DQ86XP0 818 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 LDLRAD3Q86YD5 345 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 RHOT2Q8IXI1 618 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SFRP1Q8N474 314 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ZCCHC9Q8N567 271 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 MYCT1Q8N699 235 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CSGALNACT2Q8N6G5 542 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ARFGAP1Q8N6T3 406 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 HORMAD2Q8N7B1 307 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM87AQ8NBN3 555 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 GANCQ8TET4 914 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 KBTBD7Q8WVZ9 684 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 POP5Q969H6 163 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ERP27Q96DN0 273 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TEKT5Q96M29 485 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 Q96MF0 132 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF396Q96N95 335 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PPP1R2P1Q96PQ5 205 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 MDFIQ99750 246 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 B9D2Q9BPU9 175 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CORO1BQ9BR76 489 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 LLPHQ9BRT6 129 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 LRRC61Q9BV99 259 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 KIR3DX1Q9H7L2 352 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CRNNQ9UBG3 495 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 FBXL3Q9UKT7 428 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EXOC7Q9UPT5 735 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 COQ4Q9Y3A0 265 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF175Q9Y473 711 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 POMT1Q9Y6A1 747 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CACNA1EQ15878 2313 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 C17orf113A0A1B0GUU1 675 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 A0A1B0GWJ7 208 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SIGLEC16A6NMB1 481 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PATE3B3GLJ2 98 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 KRIT1O00522 736 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF213O14771 459 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 FPGTO14772 594 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 XPO1O14980 1071 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ICMTO60725 284 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 UPP2O95045 317 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 BAG4O95429 457 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TFP02787 698 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 HRGP04196 525 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PRB1P04280 392 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ANXA6P08133 673 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ACADMP11310 421 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 COL6A2P12110 1019 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PDCP20941 246 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 UGT1A3P35503 534 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ACADSBP45954 432 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 OR1G1P47890 313 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CDH4P55283 916 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 FAM3BP58499 235 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 DCAF7P61962 342 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TIMM10P62072 90 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 BFSP1Q12934 665 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SP140Q13342 867 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ARHGEF7Q14155 803 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PDK1Q15118 436 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM132AQ24JP5 1023 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PRICKLE4Q2TBC4 344 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 NPNTQ6UXI9 565 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 LINC00114Q6XXX2 140 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SH2D5Q6ZV89 423 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 USP49Q70CQ1 688 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 RNF44Q7L0R7 432 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EPM2AIP1Q7L775 607 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SLC47A2Q86VL8 602 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SPATA6LQ8N4H0 392 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SH2D3CQ8N5H7 860 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ZFP62Q8NB50 900 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 OR2Y1Q8NGV0 311 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 MAGEE2Q8TD90 523 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 IPCEF1Q8WWN9 437 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 STARD8Q92502 1023 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EFHD2Q96C19 240 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 MCRS1Q96EZ8 462 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 CCDC120Q96HB5 630 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms