RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 GRIA3P42263 894 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 SEC13P55735 322 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 NFYCQ13952 458 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 HNRNPDQ14103 355 aaKnown RBP11.78□□□□□ -0.52
HDAC6-201ENST00000334136 PPM1JQ5JR12 505 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 C6orf52Q5T4I8 152 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 AGAP9Q5VTM2 703 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 MBLAC2Q68D91 279 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 SCML4Q8N228 414 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 MYLIPQ8WY64 445 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 C1orf74Q96LT6 269 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 EBNA1BP2Q99848 306 aaKnown RBP11.78□□□□□ -0.52
HDAC6-201ENST00000334136 TTLL2Q9BWV7 592 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 SORCS3Q9UPU3 1222 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 MATN3O15232 486 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 CYP2A6P11509 494 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-201ENST00000334136 ATP6V1B2P21281 511 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 ITGADQ13349 1161 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 CNPY1Q3B7I2 92 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 CCDC153Q494R4 210 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 GALNTL6Q49A17 601 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 USP45Q70EL2 814 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 ITFG1Q8TB96 612 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 NAT14Q8WUY8 206 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-201ENST00000334136 TSPAN17Q96FV3 270 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 TNKS2Q9H2K2 1166 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 PPM1HQ9ULR3 514 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 IRAK3Q9Y616 596 aa11.78□□□□□ -0.52
HDAC6-201ENST00000334136 ITGA2BP08514 1039 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 LINGO3P0C6S8 592 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 HMOX2P30519 316 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 RPL14P50914 215 aaKnown RBP11.77□□□□□ -0.52
HDAC6-201ENST00000334136 AASDHQ4L235 1098 aaPredicted RBP11.77□□□□□ -0.52
HDAC6-201ENST00000334136 STXBP5Q5T5C0 1151 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 EMC10Q5UCC4 262 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 MRNIPQ6NTE8 343 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 KLHDC10Q6PID8 442 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 KBTBD2Q8IY47 623 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 RIN3Q8TB24 985 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 LRRC39Q96DD0 335 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 CAB39LQ9H9S4 337 aa11.77□□□□□ -0.52
HDAC6-201ENST00000334136 SIN3BO75182 1162 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 ASLP04424 464 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 UGT2B4P06133 528 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 ITGALP20701 1170 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 HOXA9P31269 272 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 NPY2RP49146 381 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 WNT3AP56704 352 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 DLG2Q15700 870 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 PTRHD1Q6GMV3 140 aaKnown RBP11.77□□□□□ -0.53
HDAC6-201ENST00000334136 ANKRD54Q6NXT1 300 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 MYO1HQ8N1T3 1032 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 GLMNQ92990 594 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 DAPK2Q9UIK4 370 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 FCF1Q9Y324 198 aaKnown RBP11.77□□□□□ -0.53
HDAC6-201ENST00000334136 UTRNP46939 3433 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 SLCO1B7G3V0H7 640 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 TMEM63AO94886 807 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 FKBP9O95302 570 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 DNTTP04053 509 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 PGAM1P18669 254 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 SERPINH1P50454 418 aaKnown RBP11.77□□□□□ -0.53
HDAC6-201ENST00000334136 ECT2LQ008S8 904 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 CDK18Q07002 472 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 CYP51A1Q16850 503 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 RAB6CQ53S08 254 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 ALFQ53S48 1182 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 AAGABQ6PD74 315 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 TTC23LQ6PF05 361 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 ADGRD2Q7Z7M1 963 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 BANPQ8N9N5 519 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 FAM156AQ8NDB6 213 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 PHF12Q96QT6 1004 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 RNF38Q9H0F5 515 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 RAB6CQ9H0N0 254 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 COG4Q9H9E3 785 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 NSMCE4AQ9NXX6 385 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 UTP6Q9NYH9 597 aaKnown RBP11.77□□□□□ -0.53
HDAC6-201ENST00000334136 CDH22Q9UJ99 828 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 LRRC42Q9Y546 428 aa11.77□□□□□ -0.53
HDAC6-201ENST00000334136 BCLAF3A2AJT9 711 aaKnown RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 RGSL1A5PLK6 1076 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 KRT75O95678 551 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 ACVRL1P37023 503 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 KRT72Q14CN4 511 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 ACOX1Q15067 660 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 GLT6D1Q7Z4J2 308 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 GIPC3Q8TF64 312 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 QKIQ96PU8 341 aaKnown RBP eCLIP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 GDF15Q99988 308 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 DGCR6LQ9BY27 220 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 EXOSC4Q9NPD3 245 aaKnown RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 NME7Q9Y5B8 376 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 A0A087WXM4 84 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms