RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 BORAQ6PGQ7 559 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 MRPL10Q7Z7H8 261 aaKnown RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 MIB1Q86YT6 1006 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CLVS1Q8IUQ0 354 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ANKFN1Q8N957 763 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 ARRDC2Q8TBH0 407 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CYGBQ8WWM9 190 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 HSPBAP1Q96EW2 488 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 TMEM74Q96NL1 305 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 EFHD1Q9BUP0 239 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CCM2LQ9NUG4 571 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-201ENST00000333371 POLG2Q9UHN1 485 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 CDC14AQ9UNH5 594 aa12.29□□□□□ -0.44
VPS33B-201ENST00000333371 GBF1Q92538 1859 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 UBA6A0AVT1 1052 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 AZIN1O14977 448 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 BAIAP3O94812 1187 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 SLC2A3P11169 496 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ACVRL1P37023 503 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 RENBPP51606 427 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 EFEMP1Q12805 493 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 MYBPC3Q14896 1274 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 MS4A13Q5J8X5 152 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 RAP1GAP2Q684P5 730 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ZBTB46Q86UZ6 589 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 TTC9BQ8N6N2 239 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 TTC16Q8NEE8 873 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ABTB1Q969K4 478 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 CLK4Q9HAZ1 481 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 RNF103-CHMP3A0A140T963 221 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ENPP3O14638 875 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ARPC2O15144 300 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 INPP4BO15327 924 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 SLC7A4O43246 635 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 CLASP2O75122 1294 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 BMP2P12643 396 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 FDXRP22570 491 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 YAP1P46937 504 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ACADVLP49748 655 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 AGTR2P50052 363 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 SCNN1BP51168 640 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 SH3BGRP55822 239 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 GALNT1Q10472 559 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 TMED1Q13445 227 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 LPIN1Q14693 890 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 MIER2Q8N344 545 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 KLHDC9Q8NEP7 349 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 DUS3LQ96G46 650 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 C1orf50Q9BV19 199 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 ADI1Q9BV57 179 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 TRMT13Q9NUP7 481 aaKnown RBP12.28□□□□□ -0.44
VPS33B-201ENST00000333371 GALPQ9UBC7 116 aa12.28□□□□□ -0.44
VPS33B-201ENST00000333371 A0A0U1RQF3 1178 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 A0A0U1RQS6 177 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 ASPDHA6ND91 283 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 H0YJX3 145 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 CD3EAPO15446 510 aaKnown RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF623O75123 536 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 STAMBPO95630 424 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 ALDH1A1P00352 501 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF37AP17032 561 aaPredicted RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 EEF1DP29692 281 aaKnown RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 CDK9P50750 372 aaKnown RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 POLD3Q15054 466 aaPredicted RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 RPS6KA2Q15349 733 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 PAGE3Q5JUK9 113 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 TTC33Q6PID6 262 aaPredicted RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 ROPN1LQ96C74 230 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 LRRC58Q96CX6 371 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 LMCD1Q9NZU5 365 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 TSR3Q9UJK0 312 aaKnown RBP12.27□□□□□ -0.44
VPS33B-201ENST00000333371 NDUFAF1Q9Y375 327 aa12.27□□□□□ -0.44
VPS33B-201ENST00000333371 SUPT3HB4E1H0 165 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 EI24O14681 340 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 PFDN1O60925 122 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 SUPT3HO75486 399 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 GLP2RO95838 553 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 CDKN1CP49918 316 aaPredicted RBP12.27□□□□□ -0.45
VPS33B-201ENST00000333371 MAPK10P53779 464 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 TSPY1Q01534 308 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 PYCR3Q53H96 274 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
VPS33B-201ENST00000333371 UGT3A1Q6NUS8 523 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 PAQR3Q6TCH7 311 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 HACD2Q6Y1H2 254 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 ZNF683Q8IZ20 524 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 ADGRG5Q8IZF4 528 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 ATOH8Q96SQ7 321 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 CYP2S1Q96SQ9 504 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 ACOX2Q99424 681 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms