RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PCMTD2Q9NV79 361 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 CRYL1Q9Y2S2 319 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 FAM47DPA6NHR8 397 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 DNAJC8O75937 253 aaPredicted RBP23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SRP72O76094 671 aaKnown RBP23.16■■□□□ 1.3
TSEN54-201ENST00000333213 GSTA1P08263 222 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 NTSR1P30989 418 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 PSMD8P48556 350 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 MNAT1P51948 309 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 DPPA4Q7L190 304 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 CACUL1Q86Y37 369 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 ANKS4BQ8N8V4 417 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 ANKRD42Q8N9B4 389 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 CCDC197Q8NCU1 140 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 TACO1Q9BSH4 297 aaKnown RBP23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SLC39A10Q9ULF5 831 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 FAM95CA0A1B0GW59 222 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 CHUKO15111 745 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 PRAMEF1O95521 474 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 CYP2A6P11509 494 aaPredicted RBP23.16■■□□□ 1.3
TSEN54-201ENST00000333213 GLULP15104 373 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SPINT3P49223 89 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 COPAP53621 1224 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SATB1Q01826 763 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 LRRC14Q15048 493 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 ZRANB3Q5FWF4 1079 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 ZNF549Q6P9A3 640 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 PIGWQ7Z7B1 504 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SLC41A1Q8IVJ1 513 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 CEP97Q8IW35 865 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 TXNDC5Q8NBS9 432 aaKnown RBP23.16■■□□□ 1.3
TSEN54-201ENST00000333213 MAGEC3Q8TD91 643 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 TCP10LQ8TDR4 215 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 OMDQ99983 421 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SLC13A1Q9BZW2 595 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 CD248Q9HCU0 757 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 SLC40A1Q9NP59 571 aa23.16■■□□□ 1.3
TSEN54-201ENST00000333213 A0A1W2PQF6 199 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 AREL1O15033 823 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 ADRB3P13945 408 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 ZNF30P17039 623 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 GM2AP17900 193 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 COL9A1P20849 921 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 TYK2P29597 1187 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 DRD3P35462 400 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 WDR4P57081 412 aaKnown RBP23.15■■□□□ 1.3
TSEN54-201ENST00000333213 CCINQ13939 588 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 ARHGEF7Q14155 803 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 DSG4Q86SJ6 1040 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 GABPB2Q8TAK5 448 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-201ENST00000333213 MGARPQ8TDB4 240 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 KCNV2Q8TDN2 545 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 FAM3CQ92520 227 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 ALKBH8Q96BT7 664 aaKnown RBP23.15■■□□□ 1.3
TSEN54-201ENST00000333213 CCDC97Q96F63 343 aaPredicted RBP23.15■■□□□ 1.3
TSEN54-201ENST00000333213 APOPT1Q96IL0 206 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 MKRN2Q9H000 416 aaKnown RBP23.15■■□□□ 1.3
TSEN54-201ENST00000333213 CD84Q9UIB8 345 aa23.15■■□□□ 1.3
TSEN54-201ENST00000333213 SMG5Q9UPR3 1016 aaKnown RBP23.15■■□□□ 1.3
TSEN54-201ENST00000333213 GLYATL1P3A0A0U1RQE8 302 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 UGT1A6P19224 532 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 SAT1P21673 171 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 UGT1A1P22309 533 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 UGT1A4P22310 534 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 XPAP23025 273 aaPredicted RBP23.14■■□□□ 1.3
TSEN54-201ENST00000333213 UGT1A3P35503 534 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 UGT1A5P35504 534 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 SPAM1P38567 509 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 P2RY2P41231 377 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 NEK3P51956 506 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 SLC18A1P54219 525 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 ZNF460Q14592 562 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 CHRNA6Q15825 494 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 PUS10Q3MIT2 529 aaKnown RBP23.14■■□□□ 1.3
TSEN54-201ENST00000333213 FBXL19Q6PCT2 694 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 CCDC91Q7Z6B0 441 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 SDCCAG8Q86SQ7 713 aaPredicted RBP23.14■■□□□ 1.3
TSEN54-201ENST00000333213 AADATQ8N5Z0 425 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 GPATCH11Q8N954 259 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 LPGAT1Q92604 370 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 OLFM1Q99784 485 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 NSRP1Q9H0G5 558 aaKnown RBP23.14■■□□□ 1.3
TSEN54-201ENST00000333213 SLC17A7Q9P2U7 560 aa23.14■■□□□ 1.3
TSEN54-201ENST00000333213 C1QTNF3-AMACRE9PGA6 284 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 MID1O15344 667 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 OR1I1O60431 355 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 KLF8O95600 359 aaPredicted RBP23.14■■□□□ 1.29
TSEN54-201ENST00000333213 SERPINB8P50452 374 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 TAS2R39P59534 338 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 CACNG1Q06432 222 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 CNTN1Q12860 1018 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 NFATC2Q13469 925 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 USP10Q14694 798 aaKnown RBP23.14■■□□□ 1.29
TSEN54-201ENST00000333213 LIPIQ6XZB0 460 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 Q6ZVL8 140 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 ERN2Q76MJ5 926 aaKnown RBP23.14■■□□□ 1.29
TSEN54-201ENST00000333213 ACMSDQ8TDX5 336 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 PPP1R16AQ96I34 528 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 INTS9Q9NV88 658 aaKnown RBP23.14■■□□□ 1.29
TSEN54-201ENST00000333213 APPL1Q9UKG1 709 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms