RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 BPIFB6Q8NFQ5 453 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 OR13F1Q8NGS4 319 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 TMEM74Q96NL1 305 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 MUS81Q96NY9 551 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 SLC30A3Q99726 388 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 TRIM54Q9BYV2 358 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 POLR3BQ9NW08 1133 aaPredicted RBP23.54■■□□□ 1.36
TSKU-201ENST00000333090 USP22Q9UPT9 525 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 PTGESO14684 152 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 MATN4O95460 622 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 ALBP02768 609 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 MAXP61244 160 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 PYCR3Q53H96 274 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 USP51Q70EK9 711 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 DNAJB3Q8WWF6 145 aa23.54■■□□□ 1.36
TSKU-201ENST00000333090 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.54■■□□□ 1.36
TSKU-201ENST00000333090 OAS3Q9Y6K5 1087 aaKnown RBP23.54■■□□□ 1.36
TSKU-201ENST00000333090 C1orf232A0A0U1RR37 186 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 S1PR4O95977 384 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 BCL10O95999 233 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 FUT4P22083 530 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 PHEXP78562 749 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 NFKB2Q00653 900 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 FBXO48Q5FWF7 155 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 GALNT18Q6P9A2 607 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 RAB44Q7Z6P3 723 aaPredicted RBP23.53■■□□□ 1.36
TSKU-201ENST00000333090 PPP1R2P1Q96PQ5 205 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 MPP6Q9NZW5 540 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 KCNH4Q9UQ05 1017 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 PAGE1O75459 146 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 FGF4P08620 206 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 ADARB1P78563 741 aaKnown RBP23.53■■□□□ 1.36
TSKU-201ENST00000333090 ECT2LQ008S8 904 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 GRSF1Q12849 480 aaKnown RBP eCLIP23.53■■□□□ 1.36
TSKU-201ENST00000333090 SNX17Q15036 470 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 TEX37Q96LM6 180 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 RNF145Q96MT1 663 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 TUBA1CQ9BQE3 449 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 CATSPERBQ9H7T0 1116 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 A0A1B0GTL3 188 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 UNCXA6NJT0 531 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 WISP3O95389 354 aaPredicted RBP23.53■■□□□ 1.36
TSKU-201ENST00000333090 CPNE6O95741 557 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 IDO1P14902 403 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 CD1DP15813 335 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 FOXM1Q08050 763 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 PAGE3Q5JUK9 113 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 KANK2Q63ZY3 851 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 TMEM214Q6NUQ4 689 aaKnown RBP23.53■■□□□ 1.36
TSKU-201ENST00000333090 ZNF773Q6PK81 442 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 SMARCD1Q96GM5 515 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 ING2Q9H160 280 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 TRNAU1APQ9NX07 287 aaKnown RBP23.53■■□□□ 1.36
TSKU-201ENST00000333090 SLAMF8Q9P0V8 285 aa23.53■■□□□ 1.36
TSKU-201ENST00000333090 CFAP99D6REC4 459 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 KPNA6O60684 536 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 KCNH1O95259 989 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 AXLP30530 894 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 KCNK10P57789 538 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 TIGD7Q6NT04 549 aaPredicted RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 KDELC1Q6UW63 502 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 CHPT1Q8WUD6 406 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 PABPC5Q96DU9 382 aaKnown RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 FCRL2Q96LA5 508 aaPredicted RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 GLT1D1Q96MS3 346 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 CHID1Q9BWS9 393 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 YTHDF1Q9BYJ9 559 aaKnown RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 SLC52A3Q9NQ40 469 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 A0A1W2PP18 115 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 RRN3P2A6NIE6 340 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 MSI1O43347 362 aaKnown RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 MOCS2O96007 188 aaPredicted RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 SMPD1P17405 629 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 CD86P42081 329 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 ITGADQ13349 1161 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 SPIDRQ14159 915 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 OR4D1Q15615 310 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 NCCRP1Q6ZVX7 275 aaPredicted RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 OR6J1Q8NGC5 347 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 PNPT1Q8TCS8 783 aaKnown RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 ASB2Q96Q27 587 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 TSPYL2Q9H2G4 693 aaPredicted RBP23.52■■□□□ 1.36
TSKU-201ENST00000333090 NT5MQ9NPB1 228 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 GNPTGQ9UJJ9 305 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 KCTD3Q9Y597 815 aa23.52■■□□□ 1.36
TSKU-201ENST00000333090 CRCPO75575 148 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 MBL2P11226 248 aaPredicted RBP23.51■■□□□ 1.35
TSKU-201ENST00000333090 TMBIM6P55061 237 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 CDC42EP1Q00587 391 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 BFSP2Q13515 415 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 FSCN1Q16658 493 aaKnown RBP23.51■■□□□ 1.35
TSKU-201ENST00000333090 RGS21Q2M5E4 152 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 PRAMEF19Q5SWL8 479 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 PTRH1Q86Y79 214 aaKnown RBP23.51■■□□□ 1.35
TSKU-201ENST00000333090 SNX19Q92543 992 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 C1orf50Q9BV19 199 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 CCDC68Q9H2F9 335 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 TIMM22Q9Y584 194 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 ASPDHA6ND91 283 aa23.51■■□□□ 1.35
TSKU-201ENST00000333090 SLC26A3P40879 764 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms