RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CDKL2Q92772 493 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ACOX2Q99424 681 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ZFYVE1Q9HBF4 777 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ITM2CQ9NQX7 267 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 PKP3Q9Y446 797 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF711Q9Y462 761 aa9.48□□□□□ -0.89
C11orf54-201ENST00000331239 IQANK1A0A1B0GTG1 560 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 TCRBV9S1A1TA0A576 114 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 A8MUI8 341 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 C10orf142B7Z368 130 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 PIGNO95427 931 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 IL1BP01584 269 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 PDHA1P08559 390 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 TROVE2P10155 538 aaKnown RBP eCLIP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 HLA-EP13747 358 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 ADRB3P13945 408 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 HNF1BP35680 557 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 MMP12P39900 470 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 STC1P52823 247 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SEC13P55735 322 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SESN2P58004 480 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 ARHGEF7Q14155 803 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 GPR33Q49SQ1 333 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 AARS2Q5JTZ9 985 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 GLT6D1Q7Z4J2 308 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 C11orf74Q86VG3 221 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SLC26A11Q86WA9 606 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 CNTN4Q8IWV2 1026 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF398Q8TD17 642 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SIPA1Q96FS4 1042 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 MYCBPQ99417 103 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 FAM167BQ9BTA0 163 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 MFSD1Q9H3U5 465 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SYBUQ9NX95 663 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 PKD2L2Q9NZM6 624 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 IL17CQ9P0M4 197 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 USP36Q9P275 1121 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 MUTYHQ9UIF7 546 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 CORO1CQ9ULV4 474 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 IKBKGQ9Y6K9 419 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 GOLGA8RI6L899 631 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 KPNA3O00505 521 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 PLRG1O43660 514 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 RPP40O75818 363 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 APBB3O95704 486 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 MT-ND3P03897 115 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 INHBAP08476 426 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 CCND1P24385 295 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 CNTFP26441 200 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 GRIA1P42261 906 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 DPTQ07507 201 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 UBXN2BQ14CS0 331 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SPDYAQ5MJ70 313 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 CERCAMQ5T4B2 595 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 PARS2Q7L3T8 475 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 TTC7BQ86TV6 843 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 TMPRSS6Q8IU80 811 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 IGDCC3Q8IVU1 814 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SFTPA1Q8IWL2 248 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 AGGF1Q8N302 714 aaeCLIP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SLC25A41Q8N5S1 370 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 PAF1Q8N7H5 531 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 SLC44A1Q8WWI5 657 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 ARRDC3Q96B67 414 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 APOPT1Q96IL0 206 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 UHRF1Q96T88 793 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 KLF6Q99612 283 aaPredicted RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 TTC1Q99614 292 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 C1QTNF7Q9BXJ2 289 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 GPR63Q9BZJ6 419 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 VPS11Q9H270 941 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 EBF2Q9HAK2 575 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 NPHS2Q9NP85 383 aa9.47□□□□□ -0.89
C11orf54-201ENST00000331239 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 NDRG2Q9UN36 371 aaKnown RBP9.47□□□□□ -0.89
C11orf54-201ENST00000331239 ZCWPW2A0A1B0GU75 182 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 F8W8V4 182 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 STX7O15400 261 aaKnown RBP9.46□□□□□ -0.89
C11orf54-201ENST00000331239 WFS1O76024 890 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 ACADMP11310 421 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 OGNP20774 298 aaKnown RBP9.46□□□□□ -0.89
C11orf54-201ENST00000331239 CRYMQ14894 314 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 KBTBD12Q3ZCT8 623 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 IER5LQ5T953 404 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 PIP5KL1Q5T9C9 394 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 AFTPHQ6ULP2 937 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 CRTC1Q6UUV9 634 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 CERS6Q6ZMG9 384 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 UNC5AQ6ZN44 842 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 MMAAQ8IVH4 418 aaKnown RBP9.46□□□□□ -0.89
C11orf54-201ENST00000331239 GRIN3AQ8TCU5 1115 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 INPP5DQ92835 1189 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 ULK4Q96C45 1275 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 PCDH12Q9NPG4 1184 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 SLC17A7Q9P2U7 560 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 ZNF180Q9UJW8 692 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 L3MBTL1Q9Y468 752 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 FADS3Q9Y5Q0 445 aa9.46□□□□□ -0.89
C11orf54-201ENST00000331239 MAD1L1Q9Y6D9 718 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms