RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 R3HDMLQ9H3Y0 253 aa24.26■■□□□ 1.47
SOX1-201ENST00000330949 TOR3AQ9H497 397 aa24.26■■□□□ 1.47
SOX1-201ENST00000330949 MGAMO43451 1857 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 TAF4O00268 1085 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 CCNKO75909 580 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 ZBTB7AO95365 584 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 POU5F1BQ06416 359 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 PYCR3Q53H96 274 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 TMEM236Q5W0B7 351 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 RPL10LQ96L21 214 aaKnown RBP24.25■■□□□ 1.47
SOX1-201ENST00000330949 CDK5RAP1Q96SZ6 601 aaKnown RBP24.25■■□□□ 1.47
SOX1-201ENST00000330949 TRMOQ9BU70 441 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 CCDC90BQ9GZT6 254 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 COL11A1P12107 1806 aaPredicted RBP24.25■■□□□ 1.47
SOX1-201ENST00000330949 A8MT66 165 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 INCA1Q0VD86 236 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 UGT3A2Q3SY77 523 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 ZNF484Q5JVG2 852 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 KCTD11Q693B1 232 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 MPZL3Q6UWV2 235 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 CYHR1Q6ZMK1 362 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 DEFB132Q7Z7B7 95 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 STK32CQ86UX6 486 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 SNX18Q96RF0 628 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 FAM118AQ9NWS6 357 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 GABBR2O75899 941 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 SOAT2O75908 522 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 UBA1P22314 1058 aaKnown RBP24.25■■□□□ 1.47
SOX1-201ENST00000330949 LIPEQ05469 1076 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 ACOX1Q15067 660 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 CATSPEREQ5SY80 951 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 PAGE2Q7Z2X7 111 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 P2RY8Q86VZ1 359 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 NAT16Q8N8M0 369 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 SUN5Q8TC36 379 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 ATL1Q8WXF7 558 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 SDCCAG3Q96C92 435 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 BIRC7Q96CA5 298 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 PCYT2Q99447 389 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 NT5C1AQ9BXI3 368 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 NIFKQ9BYG3 293 aaKnown RBP24.25■■□□□ 1.47
SOX1-201ENST00000330949 NTN4Q9HB63 628 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 PCDHGB1Q9Y5G3 927 aa24.25■■□□□ 1.47
SOX1-201ENST00000330949 DNAH12Q6ZR08 3092 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 DAB1O75553 588 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 STAT5BP51692 787 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 UBE2UQ5VVX9 321 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 CLEC6AQ6EIG7 209 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 DCP1BQ8IZD4 617 aaKnown RBP24.24■■□□□ 1.47
SOX1-201ENST00000330949 RORBQ92753 470 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 TMBIM1Q969X1 311 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 RPF1Q9H9Y2 349 aaKnown RBP24.24■■□□□ 1.47
SOX1-201ENST00000330949 SLCO3A1Q9UIG8 710 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 INO80B-WBP1J3KQ70 363 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 PRKCAP17252 672 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 PTPN3P26045 913 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 VBP1P61758 197 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 CCDC58Q4VC31 144 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 TUBA3EQ6PEY2 450 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 PRSS48Q7RTY5 328 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 PROSER1Q86XN7 944 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 LGI2Q8N0V4 545 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 TTC39CQ8N584 583 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 DNERQ8NFT8 737 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 FEM1AQ9BSK4 669 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 B3GNT5Q9BYG0 378 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 AKTIPQ9H8T0 292 aa24.24■■□□□ 1.47
SOX1-201ENST00000330949 MN1Q10571 1320 aaPredicted RBP24.23■■□□□ 1.47
SOX1-201ENST00000330949 PRSS23O95084 383 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 CXCL8P10145 99 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 CHRM3P20309 590 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 CYP2B6P20813 491 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 SLC12A2P55011 1212 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 LSM3P62310 102 aaKnown RBP24.23■■□□□ 1.47
SOX1-201ENST00000330949 YBX1P67809 324 aaKnown RBP24.23■■□□□ 1.47
SOX1-201ENST00000330949 PRR23CQ6ZRP0 262 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 RPS27LQ71UM5 84 aaKnown RBP24.23■■□□□ 1.47
SOX1-201ENST00000330949 ZBTB8OSQ8IWT0 167 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 C12orf29Q8N999 325 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 RASSF5Q8WWW0 418 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 SETD4Q9NVD3 440 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 STAP1Q9ULZ2 295 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 SATB2Q9UPW6 733 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 V9GYQ6 96 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 PTGES3LE9PB15 166 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 SLC1A7O00341 560 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 MATN4O95460 622 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 NFICP08651 508 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 TPH1P17752 444 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 ALDH4A1P30038 563 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 TKTL1P51854 596 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 GNG2P59768 71 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 TECRLQ5HYJ1 363 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 FAR1Q8WVX9 515 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 BTBD2Q9BX70 525 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 SLIRPQ9GZT3 109 aaKnown RBP24.23■■□□□ 1.47
SOX1-201ENST00000330949 ZNF221Q9UK13 617 aa24.23■■□□□ 1.47
SOX1-201ENST00000330949 SYCE1LA8MT33 242 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 EVPLLA8MZ36 301 aa24.22■■□□□ 1.47
SOX1-201ENST00000330949 AP3B1O00203 1094 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms