RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CNDP1Q96KN2 507 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 GPR21Q99679 349 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 TBC1D10AQ9BXI6 508 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 CPEB1Q9BZB8 566 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 TAS2R13Q9NYV9 303 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 DPP7Q9UHL4 492 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 IKZF3Q9UKT9 509 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 VPS9D1Q9Y2B5 631 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 PPIL1Q9Y3C6 166 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 C1orf232A0A0U1RR37 186 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CAPN8A6NHC0 703 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 A8MX80 341 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 RASSF2P50749 326 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CCNHP51946 323 aaPredicted RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 SULT2A1Q06520 285 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 TTC31Q49AM3 519 aaPredicted RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 TSPAN33Q86UF1 283 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 KDM1BQ8NB78 822 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CHST14Q8NCH0 376 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 TUBGCP5Q96RT8 1024 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 P2RY12Q9H244 342 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CCDC68Q9H2F9 335 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 PIDD1Q9HB75 910 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 IL26Q9NPH9 171 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 NCKIPSDQ9NZQ3 722 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 FBXO10Q9UK96 956 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 PRR5-ARHGAP8B1AHC4 643 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 HNRNPCL1O60812 293 aaKnown RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 NIPSNAP2O75323 286 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 PAPLNO95428 1278 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 POP4O95707 220 aaKnown RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 BPIP17213 487 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 IMPDH1P20839 514 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CD9P21926 228 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CALB2P22676 271 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 SP100P23497 879 aaPredicted RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 PTGER3P43115 390 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 ARHGAP8P85298 464 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 SEMG2Q02383 582 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 DHCR24Q15392 516 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CRTC1Q6UUV9 634 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 FAM151BQ6UXP7 276 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 TMC5Q6UXY8 1006 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 RINLQ6ZS11 566 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 RPS27LQ71UM5 84 aaKnown RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 CELF5Q8N6W0 485 aaKnown RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 VN1R2Q8NFZ6 395 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 GRIN3AQ8TCU5 1115 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 CCDC97Q96F63 343 aaPredicted RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 LYSMD1Q96S90 227 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 MIPEPQ99797 713 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 C19orf43Q9BQ61 176 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 HTATIP2Q9BUP3 242 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 SLC2A11Q9BYW1 496 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 TFB2MQ9H5Q4 396 aaKnown RBP16.87■□□□□ 0.29
DDX41-201ENST00000330503 SYTL2Q9HCH5 934 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 SORCS3Q9UPU3 1222 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 ERVW-1Q9UQF0 538 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 SLC30A1Q9Y6M5 507 aa16.87■□□□□ 0.29
DDX41-201ENST00000330503 ATG2AQ2TAZ0 1938 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 NPIPB15A6NHN6 443 aaPredicted RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 SLC9A3R1O14745 358 aaPredicted RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 HDAC3O15379 428 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 CISD3P0C7P0 127 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 ESRRAP11474 423 aaPredicted RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX41-201ENST00000330503 HNRNPH1P31943 449 aaKnown RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 SERPINB5P36952 375 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 VIPR2P41587 438 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 ADARP55265 1226 aaKnown RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 GEN1Q17RS7 908 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 AARS2Q5JTZ9 985 aaKnown RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 CFAP157Q5JU67 520 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 SLC22A9Q8IVM8 553 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 ZNF557Q8N988 423 aaPredicted RBP16.86■□□□□ 0.29
DDX41-201ENST00000330503 SCRN2Q96FV2 425 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 MRGPRX3Q96LB0 322 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 OR52B2Q96RD2 323 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 DERL2Q9GZP9 239 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 STK38LQ9Y2H1 464 aa16.86■□□□□ 0.29
DDX41-201ENST00000330503 F8W8V4 182 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 PFDN6O15212 129 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 ENO1P06733 434 aaKnown RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 MTHFD2P13995 350 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 WEE1P30291 646 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 NRIP1P48552 1158 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 DUSP6Q16828 381 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 Q6ZVU0 165 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 LONP2Q86WA8 852 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 SIDT2Q8NBJ9 832 aaKnown RBP16.85■□□□□ 0.29
DDX41-201ENST00000330503 OR2A12Q8NGT7 310 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 GIMAP7Q8NHV1 300 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 RHEBL1Q8TAI7 183 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 FRS2Q8WU20 508 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 SORCS1Q8WY21 1168 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 KIAA1191Q96A73 305 aa16.85■□□□□ 0.29
DDX41-201ENST00000330503 ATOH8Q96SQ7 321 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms