RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ERVW-1Q9UQF0 538 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 PKP3Q9Y446 797 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 H0Y3Z8 333 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 WISP3O95389 354 aaPredicted RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CISD3P0C7P0 127 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ADH5P11766 374 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ARRB2P32121 409 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 GCKP35557 465 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 XIAPP98170 497 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CDKN3Q16667 212 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 TSNAXIP1Q2TAA8 658 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZYG11AQ6WRX3 759 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 PIM3Q86V86 326 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CRLF3Q8IUI8 442 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 BPIFB1Q8TDL5 484 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CYB5D2Q8WUJ1 264 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ANKRD49Q8WVL7 239 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 SMARCD2Q92925 531 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZFYVE19Q96K21 471 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 UBXN10Q96LJ8 280 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CPEB1Q9BZB8 566 aaKnown RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 SUV39H2Q9H5I1 410 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZFYVE1Q9HBF4 777 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 OXSMQ9NWU1 459 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 XPR1Q9UBH6 696 aa20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 CORO1CQ9ULV4 474 aaPredicted RBP20.21■□□□□ 0.83
RIPPLY3-201ENST00000329553 TRIM13O60858 407 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 POP4O95707 220 aaKnown RBP20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 CCDC166P0CW27 439 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 KITP10721 976 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 FDXRP22570 491 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 BLMHQ13867 455 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 NAPRTQ6XQN6 538 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 C12orf40Q86WS4 652 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 KIAA1958Q8N8K9 716 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 CHST14Q8NCH0 376 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 RDH11Q8TC12 318 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 LPGAT1Q92604 370 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 ECHDC3Q96DC8 303 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 TUBGCP5Q96RT8 1024 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 TCF12Q99081 682 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 AARSD1Q9BTE6 412 aaKnown RBP20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 ZDHHC6Q9H6R6 413 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 DZANK1Q9NVP4 752 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 MID2Q9UJV3 735 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 REV3LO60673 3130 aa20.2■□□□□ 0.82
RIPPLY3-201ENST00000329553 C1orf232A0A0U1RR37 186 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 UBA6A0AVT1 1052 aaPredicted RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 A8MX80 341 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 CLDN7O95471 211 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 ARSAP15289 507 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 ILF2Q12905 390 aaKnown RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 ZRANB3Q5FWF4 1079 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 GET4Q7L5D6 327 aaPredicted RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 GPR149Q86SP6 731 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 MCUR1Q96AQ8 359 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 MRPL38Q96DV4 380 aaKnown RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 MRGPRX3Q96LB0 322 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 ARMCX1Q9P291 453 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 MARCOQ9UEW3 520 aaPredicted RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 SUFUQ9UMX1 484 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 LINC01565O15544 149 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 NDUFS3O75489 264 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 LTA4HP09960 611 aaKnown RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 FMO4P31512 558 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 DGKGP49619 791 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 FAM83EQ2M2I3 478 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 ACSBG2Q5FVE4 666 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 OR2A12Q8NGT7 310 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 SCG3Q8WXD2 468 aaKnown RBP20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 SORT1Q99523 831 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 EBF3Q9H4W6 596 aa20.19■□□□□ 0.82
RIPPLY3-201ENST00000329553 CAPN8A6NHC0 703 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 CCDC85CA6NKD9 419 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 HOXC11O43248 304 aaPredicted RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 ATP6V1C1P21283 382 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 ABCE1P61221 599 aaKnown RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 SEMG2Q02383 582 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 KPNB1Q14974 876 aaKnown RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 AGAP9Q5VTM2 703 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 TEX9Q8N6V9 391 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 FRS2Q8WU20 508 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 MOCOSQ96EN8 888 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 ABHD8Q96I13 439 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 MRPL57Q9BQC6 102 aaKnown RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 GATA5Q9BWX5 397 aaPredicted RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 WWP1Q9H0M0 922 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 MRPL46Q9H2W6 279 aaKnown RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 OTOL1A6NHN0 477 aaPredicted RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 HEPACAM2A8MVW5 462 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 TTC34A8MYJ7 566 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 GPR39O43194 453 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 DLX3O60479 287 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 SMNDC1O75940 238 aaKnown RBP eCLIP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 ADH1CP00326 375 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 UGT2B4P06133 528 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 HOXB8P17481 243 aaPredicted RBP20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 RAD51Q06609 339 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 FAM136AQ96C01 138 aa20.18■□□□□ 0.82
RIPPLY3-201ENST00000329553 CIPCQ9C0C6 399 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms