RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PSMD8P48556 350 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 SLC18A1P54219 525 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 UBE3AQ05086 875 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 TRIM16LQ309B1 348 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 NEK5Q6P3R8 708 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 CNBD2Q96M20 576 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 PRKAG3Q9UGI9 489 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 SLC9A8Q9Y2E8 581 aa11.38□□□□□ -0.59
COL4A5-201ENST00000328300 PRAMEF1O95521 474 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 SLC26A3P40879 764 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 GNPDA1P46926 289 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 RING1Q06587 406 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ILF3Q12906 894 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 LCP2Q13094 533 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 SLC9A4Q6AI14 798 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 IZUMO2Q6UXV1 221 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 DET1Q7L5Y6 550 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 GDPD5Q8WTR4 605 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 RNF186Q9NXI6 227 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 SLC22A3O75751 556 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CDK14O94921 469 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CMPK1P30085 196 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 AKT2P31751 481 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 PCYT2Q99447 389 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 TFB2MQ9H5Q4 396 aaKnown RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 PRDM8Q9NQV8 689 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 COPG1Q9Y678 874 aaKnown RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 A8MX80 341 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ISM1B1AKI9 464 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 FSHRP23945 695 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 RPL38P63173 70 aaKnown RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ABRQ12979 859 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 TSNQ15631 228 aaKnown RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 RFWD3Q6PCD5 774 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 SAPCD2Q86UD0 394 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 Q96MT0 163 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 TTLL2Q9BWV7 592 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CLDN9O95484 217 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 PRPS2P11908 318 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 TTC27Q6P3X3 843 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 C10orf107Q8IVU9 208 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 RMND5BQ96G75 393 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 SHDQ96IW2 340 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CAPN10Q9HC96 672 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ZNF780BQ9Y6R6 833 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ERN1O75460 977 aaKnown RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 PSMG1O95456 288 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ABCB1P08183 1280 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CBSLP0DN79 551 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CBSP35520 551 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 PLIN5Q00G26 463 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 DHRSXQ8N5I4 330 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 CDYL2Q8N8U2 506 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 NEK6Q9HC98 313 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 ATP6V1HQ9UI12 483 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
COL4A5-201ENST00000328300 COL22A1Q8NFW1 1626 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-201ENST00000328300 A0A1B0GW55 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 UBXN8O00124 270 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 BUD23O43709 281 aaKnown RBP11.36□□□□□ -0.59
COL4A5-201ENST00000328300 AOC2O75106 756 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4L2P0CJ85 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4L3P0CJ86 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4L4P0CJ87 422 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4L5P0CJ88 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4L6P0CJ89 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4L7P0CJ90 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 UROSP10746 265 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 GJD3Q8N144 294 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 OR7D4Q8NG98 312 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 PPCDCQ96CD2 204 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 RNF145Q96MT1 663 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 TUBGCP5Q96RT8 1024 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 ADAMTS10Q9H324 1103 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 EXD2Q9NVH0 621 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 USE1Q9NZ43 259 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DUX4Q9UBX2 424 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 ADGRE2Q9UHX3 823 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 EDDM13A0A1B0GTR0 161 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 GSTM1P09488 218 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 SPATA31D3P0C874 917 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 MLLT6P55198 1093 aaPredicted RBP11.36□□□□□ -0.59
COL4A5-201ENST00000328300 MORN1Q5T089 497 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 SPATA31D4Q6ZUB0 917 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DEPDC4Q8N2C3 294 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 DPP10Q8N608 796 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 SH3RF2Q8TEC5 729 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 TMEM248Q9NWD8 314 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 FPGTO14772 594 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 PROCP04070 461 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 SLC11A1P49279 550 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 C17orf99Q6UX52 265 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
COL4A5-201ENST00000328300 PEX13Q92968 403 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms