RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 MTBPQ96DY7 904 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 CDKN2AIPNLQ96HQ2 116 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 DNAJC1Q96KC8 554 aaKnown RBP12.73□□□□□ -0.37
DDX39A-202ENST00000324340 FAM129BQ96TA1 746 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 ACOX2Q99424 681 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 PRSS16Q9NQE7 514 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 HEBP1Q9NRV9 189 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 IARS2Q9NSE4 1012 aaKnown RBP12.73□□□□□ -0.37
DDX39A-202ENST00000324340 NDUFA13Q9P0J0 144 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 IL17CQ9P0M4 197 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 TBK1Q9UHD2 729 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 GGT7Q9UJ14 662 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 PSAT1Q9Y617 370 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 USH1CQ9Y6N9 552 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 STON1Q9Y6Q2 735 aa12.73□□□□□ -0.37
DDX39A-202ENST00000324340 TCF20Q9UGU0 1960 aaKnown RBP12.73□□□□□ -0.37
DDX39A-202ENST00000324340 HMX2A2RU54 273 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 ANTXRLA6NF34 631 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 SHISA7A6NL88 538 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 TCP11X1B4DZS4 312 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 KRT37O76014 449 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 KRT38O76015 456 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 ASGR2P07307 311 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 IL9P15248 144 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 DRD1P21728 446 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 HADHAP40939 763 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 CSE1LP55060 971 aaKnown RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 PRAMEP78395 509 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 CAMK2GQ13555 558 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 TDGQ13569 410 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 PTPRCAPQ14761 206 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 UGP2Q16851 508 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 FSTL4Q6MZW2 842 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 KIAA0408Q6ZU52 694 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 USP45Q70EL2 814 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 LYSMD3Q7Z3D4 306 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF513Q8N8E2 541 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 C2CD4AQ8NCU7 369 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 GPR150Q8NGU9 434 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 GABPB2Q8TAK5 448 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 HDAC10Q969S8 669 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 MRRFQ96E11 262 aaKnown RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 TBATAQ96M53 351 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 PLEKHG4BQ96PX9 1271 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 RBBP8Q99708 897 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 GABRG3Q99928 467 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 ZFYVE1Q9HBF4 777 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 POLR3BQ9NW08 1133 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-202ENST00000324340 SLC17A6Q9P2U8 582 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 STK38LQ9Y2H1 464 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 CKAP5Q14008 2032 aa12.72□□□□□ -0.37
DDX39A-202ENST00000324340 C1orf232A0A0U1RR37 186 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 UPK3BL1B0FP48 263 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 UPK3BL2E5RIL1 263 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 GOLGA8TH3BQL2 631 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 STX7O15400 261 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 ZSCAN9O15535 394 aaPredicted RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 BUD23O43709 281 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 NARSO43776 548 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 EPHX1P07099 455 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 TIMP2P16035 220 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 NFKBIAP25963 317 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 ITGB7P26010 798 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 PTPN5P54829 565 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 DNAJC3Q13217 504 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 THOC5Q13769 683 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 PON2Q15165 354 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 MUM1Q2TAK8 710 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 HHATQ5VTY9 493 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 CRTC1Q6UUV9 634 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 TIFABQ6ZNK6 161 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 STRA8Q7Z7C7 330 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 CILP2Q8IUL8 1156 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 PPFIBP2Q8ND30 876 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 PIP4K2CQ8TBX8 421 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 GBP5Q96PP8 586 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 GPR63Q9BZJ6 419 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 SSU72Q9NP77 194 aaKnown RBP12.71□□□□□ -0.37
DDX39A-202ENST00000324340 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 CACNA2D2Q9NY47 1150 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 FBXO5Q9UKT4 447 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 SARDHQ9UL12 918 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
DDX39A-202ENST00000324340 A0A1W2PPM1 405 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 C16orf96A6NNT2 1141 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 CCL22O00626 93 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ZWINTO95229 277 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 CLDN7O95471 211 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 EGFP01133 1207 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms