RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PCLAFQ15004 111 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 INTS6LQ5JSJ4 861 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 FBXL19Q6PCT2 694 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 VPS33AQ96AX1 596 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 FBXL20Q96IG2 436 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 CDK15Q96Q40 435 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 CITED4Q96RK1 184 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 CHID1Q9BWS9 393 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 PRKD2Q9BZL6 878 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 STN1Q9H668 368 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 SYTL2Q9HCH5 934 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 SATB2Q9UPW6 733 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 H2AFYO75367 372 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 SEC22BO75396 215 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 RNASEH2AO75792 299 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 PENKP01210 267 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 GSNP06396 782 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 CREB5Q02930 508 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 LRRC8DQ7L1W4 858 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 C14orf80Q86SX3 495 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 CRYBG2Q8N1P7 616 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 ZBED3Q96IU2 234 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 PDZK1P1A8MUH7 402 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 AURKAO14965 403 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 CD3EAPO15446 510 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 GPSM1Q86YR5 675 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 C8orf59Q8N0T1 100 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 ATG16L2Q8NAA4 619 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 UBASH3BQ8TF42 649 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 MRPL57Q9BQC6 102 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 ASPSCR1Q9BZE9 553 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 C20orf27Q9GZN8 174 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 DNAJC28Q9NX36 388 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 LSM7Q9UK45 103 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 PSMD11O00231 422 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 SNPHO15079 494 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 MLNP12872 115 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 MZF1P28698 734 aaPredicted RBP15.21■□□□□ 0.03
VARS2-201ENST00000321897 ATP5C1P36542 298 aaKnown RBP15.21■□□□□ 0.03
VARS2-201ENST00000321897 ACVRL1P37023 503 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 NNMTP40261 264 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 ACVR1CQ8NER5 493 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 TLE6Q9H808 572 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 SPASTQ9UBP0 616 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 SF3B1O75533 1304 aaKnown RBP eCLIP15.21■□□□□ 0.035e-6■■■■■ 137.9
VARS2-201ENST00000321897 MYADML2A6NDP7 307 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 CCDC154A6NI56 674 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 TFAP2AP05549 437 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 TTKP33981 857 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 KRT33BQ14525 404 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 TERB1Q8NA31 727 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 ITFG1Q8TB96 612 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 OTULINQ96BN8 352 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 RPL10LQ96L21 214 aaKnown RBP15.21■□□□□ 0.03
VARS2-201ENST00000321897 EPB41L1Q9H4G0 881 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 VPS51Q9UID3 782 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 OAZ3Q9UMX2 235 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 PCDHB12Q9Y5F1 795 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 PTCH2Q9Y6C5 1203 aa15.21■□□□□ 0.03
VARS2-201ENST00000321897 IDH3BO43837 385 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 DLX3O60479 287 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 PFKMP08237 780 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 MTHFD1P11586 935 aaKnown RBP15.21■□□□□ 0.02
VARS2-201ENST00000321897 PCSK6P29122 969 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 PPP1R3AQ16821 1122 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 DEPDC1Q5TB30 811 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 GPR21Q99679 349 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 EPS8L2Q9H6S3 715 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 ASB8Q9H765 288 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 POLE4Q9NR33 117 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 ZNF232Q9UNY5 417 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 KCNH4Q9UQ05 1017 aa15.21■□□□□ 0.02
VARS2-201ENST00000321897 ARID1BQ8NFD5 2236 aaPredicted RBP15.21■□□□□ 0.02
VARS2-201ENST00000321897 USP54Q70EL1 1684 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 NPEPPSL1A6NEC2 478 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 ZBTB48P10074 688 aaPredicted RBP15.2■□□□□ 0.02
VARS2-201ENST00000321897 ARSAP15289 507 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 KCNQ1P51787 676 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 CYP4F2P78329 520 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 CYP4F3Q08477 520 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
VARS2-201ENST00000321897 SYTL3Q4VX76 610 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 SLC22A9Q8IVM8 553 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 PCSK9Q8NBP7 692 aaKnown RBP15.2■□□□□ 0.02
VARS2-201ENST00000321897 OSCP1Q8WVF1 389 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 KBTBD7Q8WVZ9 684 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 MED8Q96G25 268 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 NPY6RQ99463 290 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 PTGDR2Q9Y5Y4 395 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 IGKV6-21A0A0C4DH24 114 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 IPO13O94829 963 aaKnown RBP15.2■□□□□ 0.02
VARS2-201ENST00000321897 GJA5P36382 358 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 SMAD3P84022 425 aaKnown RBP15.2■□□□□ 0.02
VARS2-201ENST00000321897 DGUOKQ16854 277 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 CTC1Q2NKJ3 1217 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 ARMC4Q5T2S8 1044 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms