RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TRAPPC2P0DI81 140 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TRAPPC2BP0DI82 140 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CAPN3P20807 821 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 EDNRBP24530 442 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 NMBRP28336 390 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ADORA2BP29275 332 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 IDUAP35475 653 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CCR10P46092 362 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PAGE2BQ5JRK9 111 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 OTUD3Q5T2D3 398 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SYT6Q5T7P8 510 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TSTD2Q5T7W7 516 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 MRNIPQ6NTE8 343 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 AGMOQ6ZNB7 445 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 LGI2Q8N0V4 545 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 KIAA1958Q8N8K9 716 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 STAG3L4Q8TBR4 150 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CHAC2Q8WUX2 184 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 FKBP10Q96AY3 582 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 APOL4Q9BPW4 351 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 AKTIPQ9H8T0 292 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 RAPGEFL1Q9UHV5 662 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 RIPK3Q9Y572 518 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PCDHA9Q9Y5H5 950 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CD3EAPO15446 510 aaKnown RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 RFPL2O75678 378 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 AXLP30530 894 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SPCS2Q15005 226 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PLEKHG6Q3KR16 790 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TXNDC11Q6PKC3 985 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CATSPER4Q7RTX7 472 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 MFSD4AQ8N468 514 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PTGR2Q8N8N7 351 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GALNT6Q8NCL4 622 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CHDHQ8NE62 594 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 OR13J1Q8NGT2 312 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 MCFD2Q8NI22 146 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GRPEL2Q8TAA5 225 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ZHX1-C8orf76Q96EF9 292 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CCDC115Q96NT0 180 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 APOL2Q9BQE5 337 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CCDC90BQ9GZT6 254 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 DUSP21Q9H596 190 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TFB2MQ9H5Q4 396 aaKnown RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 MID1IP1Q9NPA3 183 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CNGB3Q9NQW8 809 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 NPAP1Q9NZP6 1156 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GREB1LQ9C091 1923 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CNTNAP1P78357 1384 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CLDN24A6NM45 220 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SLC16A6O15403 523 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SNX2O60749 519 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TPH1P17752 444 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 RCAN2Q14206 197 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 POLD3Q15054 466 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PLA2G4EQ3MJ16 856 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 FBXO47Q5MNV8 452 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 XAF1Q6GPH4 301 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 KIAA1841Q6NSI8 718 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 UGT3A1Q6NUS8 523 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SLC41A1Q8IVJ1 513 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 LRRC71Q8N4P6 559 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 PROX1Q92786 737 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GLMNQ92990 594 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 IL12RB2Q99665 862 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 B3GNT5Q9BYG0 378 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 GSTO2Q9H4Y5 243 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 IGSF5Q9NSI5 407 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 AIG1Q9NVV5 245 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ERAP1Q9NZ08 941 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 EGFL7Q9UHF1 273 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SPTLC1O15269 473 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 FGF10O15520 208 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 JRKO75564 520 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 MLYCDO95822 493 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CYBBP04839 570 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 LCP1P13796 627 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 YWHAQP27348 245 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 EPHX2P34913 555 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CLK1P49759 484 aaKnown RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TAF6P49848 677 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 EMX2Q04743 252 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CTBP1Q13363 440 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 TIMM50Q3ZCQ8 353 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 HORMAD1Q86X24 394 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ATPAF2Q8N5M1 289 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 OR8J3Q8NGG0 315 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 LILRB4Q8NHJ6 448 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF486Q96H40 463 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SEPHS2Q99611 448 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 SLC30A3Q99726 388 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 DUSP16Q9BY84 665 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CEP41Q9BYV8 373 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 OR2B2Q9GZK3 357 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 NACA2Q9H009 215 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 DSN1Q9H410 356 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 MYH14Q7Z406 1995 aaKnown RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 F5H423 210 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-201ENST00000316707 FOXD2O60548 495 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms