RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 HERC2P3Q9BVR0 1158 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 C2orf81A6NN90 581 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 NDUFS3O75489 264 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 CXCL14O95715 111 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ATXN3P54252 364 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 PFKPQ01813 784 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ASPHQ12797 758 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 PTPRNQ16849 979 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 SLC5A9Q2M3M2 681 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ALG1LQ6GMV1 187 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ISLR2Q6UXK2 745 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 SDCCAG8Q86SQ7 713 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 RNF148Q8N7C7 305 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 GABPB2Q8TAK5 448 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 EID2BQ96D98 161 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 NR1H4Q96RI1 486 aaPredicted RBP12.39□□□□□ -0.43
RNF4-201ENST00000314289 FAM192AQ9GZU8 254 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 OCEL1Q9H607 264 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 GIMAP2Q9UG22 337 aa12.39□□□□□ -0.43
RNF4-201ENST00000314289 A0A088AWK7 358 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 HIDE1A8MVS5 230 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 MAGEC1O60732 1142 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 H2AFYO75367 372 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 RFPL2O75678 378 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 TIMP1P01033 207 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 LRG1P02750 347 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 C8AP07357 584 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 COX4I1P13073 169 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 ZNF37AP17032 561 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 CD70P32970 193 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 CTSOP43234 321 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 STK19P49842 368 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 ACVR1Q04771 509 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 TRMT5Q32P41 509 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 LRRC73Q5JTD7 316 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 ACBD5Q5T8D3 534 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 FAM45BPQ6NSW5 357 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 CHST9Q7L1S5 443 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 NET1Q7Z628 596 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 FAM45AQ8TCE6 357 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 GPR21Q99679 349 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 SPATA16Q9BXB7 569 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 STN1Q9H668 368 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 UTP6Q9NYH9 597 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 LHX3Q9UBR4 397 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 CDYLQ9Y232 598 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 MED16Q9Y2X0 877 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 LCHNA4D1U4 455 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 TM7SF2O76062 418 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 CD1DP15813 335 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 ITGB6P18564 788 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 FDXRP22570 491 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 CCR2P41597 374 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 PRKAA2P54646 552 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 ACTR3P61158 418 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 DYNC1I2Q13409 638 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 ACAP2Q15057 778 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 GEN1Q17RS7 908 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 LYSMD3Q7Z3D4 306 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 CUZD1Q86UP6 607 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 HPS6Q86YV9 775 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 PTGR2Q8N8N7 351 aaPredicted RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 SIDT2Q8NBJ9 832 aaKnown RBP12.38□□□□□ -0.43
RNF4-201ENST00000314289 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
RNF4-201ENST00000314289 A0A1B0GTL3 188 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 TYW5A2RUC4 315 aaKnown RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 CDC7O00311 574 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 TXNDC9O14530 226 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 LPOP22079 712 aaPredicted RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 PIK3R1P27986 724 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 CA5AP35218 305 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 POLD2P49005 469 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 NUDT2P50583 147 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 ERVFC1P60507 584 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 NSUN2Q08J23 767 aaKnown RBP eCLIP12.37□□□□□ -0.43
RNF4-201ENST00000314289 TAF1AQ15573 450 aaPredicted RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 LIN52Q52LA3 116 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 LPCAT4Q643R3 524 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 DCBLD1Q8N8Z6 715 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 MRPS31Q92665 395 aaKnown RBP12.37□□□□□ -0.43
RNF4-201ENST00000314289 TCEAL4Q96EI5 215 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 KCNA7Q96RP8 456 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 CENPKQ9BS16 269 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 CCDC68Q9H2F9 335 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 C11orf49Q9H6J7 331 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 F8W8V4 182 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 CFLARO15519 480 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 RBP1P09455 135 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 ITGAXP20702 1163 aa12.37□□□□□ -0.43
RNF4-201ENST00000314289 KPNA2P52292 529 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms