RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CD99L2Q8TCZ2 262 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 FERD3LQ96RJ6 166 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CHCHD6Q9BRQ6 235 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 EFCAB11Q9BUY7 163 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 DUSP23Q9BVJ7 150 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TTYH3Q9C0H2 523 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CDC42EP4Q9H3Q1 356 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MID1IP1Q9NPA3 183 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ARHGEF4Q9NR80 690 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ARL8BQ9NVJ2 186 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CLN6Q9NWW5 311 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MKS1Q9NXB0 559 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SMPD4Q9NXE4 827 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 PNMA8BQ9ULN7 279 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SLC12A4Q9UP95 1085 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 N4BP2Q86UW6 1770 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 NID2Q14112 1375 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CCT8L1PA6NM43 557 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CLK2P49760 499 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CCR4P51679 360 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 FASTKQ14296 549 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ELAVL3Q14576 367 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TARBP2Q15633 366 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF621Q6ZSS3 439 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 GPRIN3Q6ZVF9 776 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 BBS12Q6ZW61 710 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TAF8Q7Z7C8 310 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RANBP3LQ86VV4 465 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SCUBE1Q8IWY4 988 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 UBR7Q8N806 425 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ADAMTS15Q8TE58 950 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ATXN2LQ8WWM7 1075 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MTERF3Q96E29 417 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SUSD3Q96L08 255 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RMDN2Q96LZ7 410 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HNRNPABQ99729 332 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RMI1Q9H9A7 625 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 C10orf71Q711Q0 1435 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF487B1APH4 448 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ADAMDEC1O15204 470 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MATN3O15232 486 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 INSIG1O15503 277 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 STK16O75716 305 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 GJB6O95452 261 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SGPL1O95470 568 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC166P0CW27 439 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 LAMP2P13473 410 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ETS1P14921 441 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 DRD1P21728 446 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TNFRSF8P28908 595 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HNF1BP35680 557 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SLC26A3P40879 764 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 AP3S2P59780 193 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RPS21P63220 83 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TYW3Q6IPR3 259 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 WDR59Q6PJI9 974 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 UNC5DQ6UXZ4 953 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF605Q86T29 641 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TRPV3Q8NET8 790 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 OR14C36Q8NHC7 312 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MYLPFQ96A32 169 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ERP27Q96DN0 273 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 DPEP2Q9H4A9 486 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SERHL2Q9H4I8 314 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SERHLQ9NQF3 203 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TAGLN3Q9UI15 199 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CLCA3PQ9Y6N3 262 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TJP1Q07157 1748 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MCM3APO60318 1980 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 A0A087X0B3 334 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ILVBLA1L0T0 632 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RFXANKO14593 260 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SPTLC1O15269 473 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MT-ND5P03915 603 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TBL3Q12788 808 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TAF10Q12962 218 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TERF2Q15554 542 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HSF5Q4G112 596 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 FAAH2Q6GMR7 532 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RNASE11Q8TAA1 199 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HAVCR2Q8TDQ0 301 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TRPC4APQ8TEL6 797 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TRIM63Q969Q1 353 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 MYO19Q96H55 970 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SEC16BQ96JE7 1060 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 FCRL2Q96LA5 508 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 FAM111AQ96PZ2 611 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 DPYSL5Q9BPU6 564 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 GORASP1Q9BQQ3 440 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ARHGAP9Q9BRR9 750 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 PTGES2Q9H7Z7 377 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CAAP1Q9H8G2 361 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM27Q9HBJ8 222 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 WDR6Q9NNW5 1121 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 GHRLQ9UBU3 117 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF229Q9UJW7 825 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 RAP2CQ9Y3L5 183 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HEATR1Q9H583 2144 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CNOT1A5YKK6 2376 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 PRORSD1PA6NEY8 169 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms