RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NFKBIZQ9BYH8 718 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 REXO4Q9GZR2 422 aaKnown RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 CATSPERBQ9H7T0 1116 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 GLOD4Q9HC38 313 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 GIMAP4Q9NUV9 329 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 SEPT3Q9UH03 358 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 PPME1Q9Y570 386 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 MICAL3Q7RTP6 2002 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 TMX2-CTNND1H3BSU7 103 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 KPNA4O00629 521 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ZSCAN9O15535 394 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ATP5BP06576 529 aaKnown RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 VAC14Q08AM6 782 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 DMC1Q14565 340 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ARMC12Q5T9G4 340 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 TAF2Q6P1X5 1199 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 EPGNQ6UW88 154 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RNF111Q6ZNA4 994 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 DENND1CQ8IV53 801 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 AUTS2Q8WXX7 1259 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 TRIB2Q92519 343 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 SCLYQ96I15 445 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 GBA3Q9H227 469 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 VPS51Q9UID3 782 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 TRAF6Q9Y4K3 522 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 DLX3O60479 287 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 KCNA5P22460 613 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 GLDCP23378 1020 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 RAB10P61026 200 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 AARS2Q5JTZ9 985 aaKnown RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 CHSY3Q70JA7 882 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 GALNT5Q7Z7M9 940 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ZC3H7AQ8IWR0 971 aaKnown RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 CENPSQ8N2Z9 138 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 POC5Q8NA72 575 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 FNDC8Q8TC99 324 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.391e-8■■■■■ 41.7
RETREG3-201ENST00000309428 SPATA17Q96L03 361 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 PPP1R10Q96QC0 940 aaKnown RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 BBS2Q9BXC9 721 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 RIBC2Q9H4K1 309 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ANAPC2Q9UJX6 822 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 IQCF5A8MTL0 148 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 PLOD2O00469 737 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 DCLK1O15075 740 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 NOBOXO60393 691 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 F9P00740 461 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ZNF37AP17032 561 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ARSDP51689 593 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 TAZQ16635 292 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 MARVELD2Q8N4S9 558 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ISOC1Q96CN7 298 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 NAA50Q9GZZ1 169 aaKnown RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 SCHIP1Q9P0W5 487 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 CDH9Q9ULB4 789 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 A0A0D9SEW6 157 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ANKRD33BA6NCL7 494 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 TAF4O00268 1085 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 HTRA2O43464 458 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 SNNO75324 88 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 RSL1D1O76021 490 aaKnown RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 ANXA9O76027 345 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 SERPINB10P48595 397 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 METTL21CQ5VZV1 264 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 CRTC3Q6UUV7 619 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-201ENST00000309428 SLCO6A1Q86UG4 719 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 FAM126BQ8IXS8 530 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 SFRP1Q8N474 314 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 OR7A2PQ8NGA2 310 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 OR2T34Q8NGX1 318 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 OR2T3Q8NH03 318 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 RNF112Q9ULX5 631 aa12.63□□□□□ -0.39
RETREG3-201ENST00000309428 CDH23Q9H251 3354 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 SYNCRIPO60506 623 aaKnown RBP12.62□□□□□ -0.39
RETREG3-201ENST00000309428 RAMP2O60895 175 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 FBXO21O94952 628 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 DBTP11182 482 aaKnown RBP12.62□□□□□ -0.39
RETREG3-201ENST00000309428 ATP5F1P24539 256 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-201ENST00000309428 NKX2-5P52952 324 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-201ENST00000309428 CYP4F2P78329 520 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 HTRA3P83110 453 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 ENPEPQ07075 957 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 SIM2Q14190 667 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-201ENST00000309428 NR6A1Q15406 480 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 CYP2A13Q16696 494 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 OGFRL1Q5TC84 451 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-201ENST00000309428 ZDHHC13Q8IUH4 622 aa12.62□□□□□ -0.39
RETREG3-201ENST00000309428 RAET1EQ8TD07 263 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms