RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CDK3Q00526 305 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 ACVR1Q04771 509 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 GRIK2Q13002 908 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 CBLBQ13191 982 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 PDE1CQ14123 709 aaPredicted RBP17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 HIF1AQ16665 826 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 GPR33Q49SQ1 333 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 TSTD2Q5T7W7 516 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 HEATR4Q86WZ0 1026 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 PHYKPLQ8IUZ5 450 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 OR13H1Q8NG92 308 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 SEC14L1Q92503 715 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 SGSM3Q96HU1 749 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 WDR92Q96MX6 357 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 CARD6Q9BX69 1037 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 TRIM31Q9BZY9 425 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 ZCCHC2Q9C0B9 1178 aaKnown RBP17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 IL26Q9NPH9 171 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 FAM114A2Q9NRY5 505 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 PIH1D1Q9NWS0 290 aaKnown RBP17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 SOX13Q9UN79 622 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 SNX24Q9Y343 169 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 OTOGLQ3ZCN5 2332 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 A0A0U1RQS6 177 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 H0Y8X5 98 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 H3BM21 787 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 GFRA3O60609 400 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 PRAMEF1O95521 474 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 TTC4O95801 387 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 WNT1P04628 370 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 ZNF883P0CG24 379 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 MGAT1P26572 445 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 PPARGP37231 505 aaPredicted RBP17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 SPEM2Q0P670 501 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 KIF19Q2TAC6 998 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 LDLRAP1Q5SW96 308 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 CASC4Q6P4E1 433 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 AFTPHQ6ULP2 937 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 ASCL5Q7RTU5 278 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 PLA2G15Q8NCC3 412 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 HEXDCQ8WVB3 486 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 BTN2A2Q8WVV5 523 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 FUBP1Q96AE4 644 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 TBATAQ96M53 351 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 TTC1Q99614 292 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 LRRC1Q9BTT6 524 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 TSPYL1Q9H0U9 437 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 BPIFA1Q9NP55 256 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 VPS18Q9P253 973 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 CA5BQ9Y2D0 317 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 SLCO1B1Q9Y6L6 691 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 SLC30A1Q9Y6M5 507 aa17.79■□□□□ 0.44
SSSCA1-201ENST00000309328 GON4LQ3T8J9 2241 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 FAM237BA0A1B0GVD1 139 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 GOLGA8MH3BSY2 632 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 EIF3HO15372 352 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 SRP72O76094 671 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 SOD1P00441 154 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 ENGP17813 658 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 RXRGP48443 463 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 TERF1P54274 439 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 PRAMEP78395 509 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 IRX4P78413 519 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 NFATC2Q13469 925 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 ZNF423Q2M1K9 1284 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 AARS2Q5JTZ9 985 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 LYPLAL1Q5VWZ2 237 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 ALS2CLQ60I27 953 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 PRR23CQ6ZRP0 262 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 SNX20Q7Z614 316 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 NOA1Q8NC60 698 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 GABPB2Q8TAK5 448 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 GLYATL1Q969I3 302 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 FAM122AQ96E09 287 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 CDKN2AIPNLQ96HQ2 116 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 COX14Q96I36 57 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 DNAJC1Q96KC8 554 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 ELF4Q99607 663 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 SYBUQ9NX95 663 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 OR1A2Q9Y585 309 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 DGKBQ9Y6T7 804 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 SDK1Q7Z5N4 2213 aa17.78■□□□□ 0.44
SSSCA1-201ENST00000309328 TNRC6BQ9UPQ9 1833 aaKnown RBP17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 LNP1A1A4G5 178 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 GOLGA8CPA6NN73 597 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 K7ESM1 405 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 VEGFDO43915 354 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 SLC25A14O95258 325 aaPredicted RBP17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 POLBP06746 335 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CCT8P50990 548 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 HNRNPKP61978 463 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CACNG1Q06432 222 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 AASDHQ4L235 1098 aaPredicted RBP17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CCDC38Q502W7 563 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 FAM151BQ6UXP7 276 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CERS6Q6ZMG9 384 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 RFLNAQ6ZTI6 216 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CENPUQ71F23 418 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms