RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SERINC5Q86VE9 423 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 EID3Q8N140 333 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF248Q8NDW4 579 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SPATS2LQ9NUQ6 558 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SAGE1Q9NXZ1 904 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 C9J4A7 227 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ADH1BP00325 375 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ATP5F1P24539 256 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CSTF2P33240 577 aaKnown RBP eCLIP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 FRG1Q14331 258 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SNX30Q5VWJ9 437 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PPP3R2Q96LZ3 170 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 NSMCE2Q96MF7 247 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 NUSAP1Q9BXS6 441 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ERVK-11Q9UQG0 969 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SLC28A2O43868 658 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SLC35G6P0C7Q6 338 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 KCNE1P15382 129 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 GJA5P36382 358 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 RPL14P50914 215 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 NCF4Q15080 339 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 UPP1Q16831 310 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 MACC1Q6ZN28 852 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SCUBE1Q8IWY4 988 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 NECTIN4Q96NY8 510 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 QKIQ96PU8 341 aaKnown RBP eCLIP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 HCN3Q9P1Z3 774 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 M0R3G1 203 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 MAN2B1O00754 1011 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 TRAFD1O14545 582 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 LRCH4O75427 683 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PIAS1O75925 651 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 KRT75O95678 551 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ACP5P13686 325 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF8P17098 575 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 S100A5P33763 92 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 HNRNPH2P55795 449 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 TBC1D25Q3MII6 688 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ACTRT2Q8TDY3 377 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CENPTQ96BT3 561 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 DEPDC7Q96QD5 511 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 MCMBPQ9BTE3 642 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 MRPS30Q9NP92 439 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ARL5AQ9Y689 179 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 LRRC10BA6NIK2 292 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 MCIDASD6RGH6 385 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ITGA2BP08514 1039 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CD48P09326 243 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 LBPP18428 481 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 RFTN1Q14699 578 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 HECTD2Q5U5R9 776 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CDCA2Q69YH5 1023 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PLEKHA7Q6IQ23 1121 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 FGD2Q7Z6J4 655 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 KYQ8NBH2 561 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PPCDCQ96CD2 204 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PKD1L3Q7Z443 1732 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 TTC24A2A3L6 582 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 BTNL10A8MVZ5 291 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 DHX15O43143 795 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PKMP14618 531 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PAICSP22234 425 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 C9orf64Q5T6V5 341 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 ABTB1Q969K4 478 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 PCYOX1Q9UHG3 505 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 DMGDHQ9UI17 866 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CD207Q9UJ71 328 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 GOT2P00505 430 aaKnown RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 BUD31P41223 144 aaPredicted RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 NAGLUP54802 743 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 MTAPQ13126 283 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 SLC13A2Q13183 592 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 LY6G5CQ5SRR4 150 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 PLD5Q8N7P1 536 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 ACE2Q9BYF1 805 aaPredicted RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 C3orf14Q9HBI5 128 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 AP5Z1O43299 807 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 RFPL2O75678 378 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF155Q12901 538 aaPredicted RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 NOMO1Q15155 1222 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 WDR93Q6P2C0 686 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 CYB5D1Q6P9G0 228 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 DEFB107AQ8IZN7 70 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 ANKLE1Q8NAG6 615 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 BRSK1Q8TDC3 778 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 ZNF490Q9ULM2 529 aaPredicted RBP10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 SQORQ9Y6N5 450 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 MICAL3Q7RTP6 2002 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 HEPACAM2A8MVW5 462 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 MMP20O60882 483 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 GPR32O75388 356 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM153BP0C7A2 387 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 CCNYL3P0C7X3 344 aa10.65□□□□□ -0.7
SYNPO2-201ENST00000307142 ALADP13716 330 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms