RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SLC12A2P55011 1212 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 PDK2Q15119 407 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 SLC25A52Q3SY17 297 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 CCDC81Q6ZN84 652 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 GK5Q6ZS86 529 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 HFE2Q6ZVN8 426 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 TAS1R1Q7RTX1 841 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 ITIH5Q86UX2 942 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 OR7A2PQ8NGA2 310 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 MARCH2Q9P0N8 246 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 PSME2Q9UL46 239 aa10.89□□□□□ -0.67
LSM3-201ENST00000306024 PTGES3LE9PB15 166 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MRASO14807 208 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 CD247P20963 164 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 CCR1P32246 355 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MCCD1P59942 119 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 MERTKQ12866 999 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 LSM12Q3MHD2 195 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 HSF5Q4G112 596 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 KIAA0319Q5VV43 1072 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 ANKRD26P1Q6NSI1 321 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 DHRS4L2Q6PKH6 230 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 CMC1Q7Z7K0 106 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SNX29P2Q8IUI4 249 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MMAAQ8IVH4 418 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 RAB2BQ8WUD1 216 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 KLHL32Q96NJ5 620 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 TKTL2Q9H0I9 626 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 OLAHQ9NV23 265 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 TMEM216Q9P0N5 145 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 PTBP2Q9UKA9 531 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 CPQQ9Y646 472 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 TEX264Q9Y6I9 313 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 WDR27A2RRH5 827 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 AURKAO14965 403 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SNX2O60749 519 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 GLUD1P00367 558 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MBL2P11226 248 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 FGF3P11487 239 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 RBL1P28749 1068 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SPRP35270 261 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 ATXN1P54253 815 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 TBX4P57082 545 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 CREMQ03060 361 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 GPNMBQ14956 572 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 WDR45BQ5MNZ6 344 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SAMD4BQ5PRF9 694 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 SYPL2Q5VXT5 272 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 NEPROQ6NW34 567 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 VASH1Q7L8A9 365 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 PARP8Q8N3A8 854 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SERPINB11Q96P15 392 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 RANBP9Q96S59 729 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 CENPOQ9BU64 300 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 SLC30A1Q9Y6M5 507 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 PDZK1P1A8MUH7 402 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 KCNU1A8MYU2 1149 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 E7ESA3 106 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 PLOD2O00469 737 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MDM4O15151 490 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 GUCY1B2O75343 617 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SEC24AO95486 1093 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SLC2A3P11169 496 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 HARS2P49590 506 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 RPL14P50914 215 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 DGUOKQ16854 277 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 HEATR6Q6AI08 1181 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 CES3Q6UWW8 571 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 SNX31Q8N9S9 440 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MCUQ8NE86 351 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 KCTD13Q8WZ19 329 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 TRIM63Q969Q1 353 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 FBXL20Q96IG2 436 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 TRPV5Q9NQA5 729 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 ZC4H2Q9NQZ6 224 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 ZNF358Q9NW07 568 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 MARCH5Q9NX47 278 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 TMEM9Q9P0T7 183 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 BAG5Q9UL15 447 aa10.88□□□□□ -0.67
LSM3-201ENST00000306024 CNOT6Q9ULM6 557 aaKnown RBP10.88□□□□□ -0.67
LSM3-201ENST00000306024 TTC3P53804 2025 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 ZSCAN5BA6NJL1 495 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 ZNF701M0R085 212 aaPredicted RBP10.87□□□□□ -0.67
LSM3-201ENST00000306024 INPP4BO15327 924 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 MSI1O43347 362 aaKnown RBP10.87□□□□□ -0.67
LSM3-201ENST00000306024 TLR5O60602 858 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 OPRL1P41146 370 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 NAGLUP54802 743 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 ITKQ08881 620 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 TCTN1Q2MV58 587 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 SMYD5Q6GMV2 418 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 CCDC149Q6ZUS6 474 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 GPRIN1Q7Z2K8 1008 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 LYSMD3Q7Z3D4 306 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 CADM3Q8N126 398 aa10.87□□□□□ -0.67
LSM3-201ENST00000306024 SLC39A11Q8N1S5 342 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms