RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 RAPGEF5Q92565 580 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 SCAMP4Q969E2 229 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 COX14Q96I36 57 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 DPYSL5Q9BPU6 564 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 MLPHQ9BV36 600 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 SUDS3Q9H7L9 328 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 NHEJ1Q9H9Q4 299 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 PKD2L2Q9NZM6 624 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 LOXL2Q9Y4K0 774 aa16.58■□□□□ 0.24
TRAPPC1-201ENST00000303731 C1orf232A0A0U1RR37 186 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ANKRD66B4E2M5 251 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 APOL1O14791 398 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ECEL1O95672 775 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 JCHAINP01591 159 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 AK4P27144 223 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 SLC5A2P31639 672 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ACTR1BP42025 376 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 POLD2P49005 469 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ACTR1AP61163 376 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 NIPAL4Q0D2K0 466 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 SLC10A2Q12908 348 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 TCEAL1Q15170 157 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 PTPRRQ15256 657 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 SLC14A2Q15849 920 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 PYCR3Q53H96 274 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ARHGAP40Q5TG30 622 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 DOK6Q6PKX4 331 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 BZW1Q7L1Q6 419 aaKnown RBP16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 SLITRK4Q8IW52 837 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 PLD5Q8N7P1 536 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 RIOK2Q9BVS4 552 aaKnown RBP16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 RMI1Q9H9A7 625 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 CPNE5Q9HCH3 593 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 ATXN7L1Q9ULK2 861 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 HEY1Q9Y5J3 304 aa16.57■□□□□ 0.24
TRAPPC1-201ENST00000303731 PMS2P1A4D2B8 440 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 KCNK1O00180 336 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 HGSO14964 777 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 CLDN7O95471 211 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 CD82P27701 267 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 CD86P42081 329 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 SPINT3P49223 89 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 MAZP56270 477 aaKnown RBP16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 AP1B1Q10567 949 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 CLN3Q13286 438 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 SQSTM1Q13501 440 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 TRA2AQ13595 282 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 IHHQ14623 411 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 TMEM164Q5U3C3 297 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 CCDC81Q6ZN84 652 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 JAMLQ86YT9 394 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 RHOT1Q8IXI2 618 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 NAGSQ8N159 534 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 CCNL2Q96S94 520 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 SRPK1Q96SB4 655 aaKnown RBP16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 FAM83DQ9H4H8 585 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 RAD18Q9NS91 495 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 SEPT10Q9P0V9 454 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 PISDQ9UG56 409 aa16.56■□□□□ 0.24
TRAPPC1-201ENST00000303731 ATMQ13315 3056 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 K7ENP7 123 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 B4GAT1O43505 415 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 ASMTLO95671 621 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 KRT1P04264 644 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 MMP2P08253 660 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 LIPCP11150 499 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 SLC2A4P14672 509 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 ALDH4A1P30038 563 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 FASLGP48023 281 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 GPLD1P80108 840 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 QPCTQ16769 361 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 TAF1BQ53T94 588 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 PHF19Q5T6S3 580 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 HENMT1Q5T8I9 393 aaKnown RBP16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 INO80CQ6PI98 192 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 RFLNAQ6ZTI6 216 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 NT5DC3Q86UY8 548 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 SFTPA2Q8IWL1 248 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 OLFM3Q96PB7 478 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 CHP1Q99653 195 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 STN1Q9H668 368 aaKnown RBP16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 TMEM98Q9Y2Y6 226 aa16.55■□□□□ 0.24
TRAPPC1-201ENST00000303731 GCN1Q92616 2671 aaKnown RBP16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 A0A0U1RQS6 177 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 GPR89AB7ZAQ6 455 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 GPR89BP0CG08 455 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 NR2C2P49116 596 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 OR1D5P58170 312 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 ZBTB17Q13105 803 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 TFDP2Q14188 446 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 AMZ1Q400G9 498 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 PDPK2PQ6A1A2 396 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 CNTD1Q8N815 330 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 AVL9Q8NBF6 648 aa16.54■□□□□ 0.24
TRAPPC1-201ENST00000303731 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms