RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 KCNE2Q9Y6J6 123 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 GATBO75879 557 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 OR5F1O95221 314 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PAPSS2O95340 614 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ADRB2P07550 413 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DNAJB1P25685 340 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 NOMO3P69849 1222 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PPP3CAQ08209 521 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 LCP2Q13094 533 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 SWI5Q1ZZU3 235 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 TRAPPC5Q8IUR0 188 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF248Q8NDW4 579 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ZFP14Q9HCL3 533 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 POLLQ9UGP5 575 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 HMGXB4Q9UGU5 601 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 GIT1Q9Y2X7 761 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 NALCNQ8IZF0 1738 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 LRRC14BA6NHZ5 514 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 FPGTO14772 594 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DHX15O43143 795 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ZMPSTE24O75844 475 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CYP4B1P13584 511 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ITIH1P19827 911 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 HUNKP57058 714 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 EIF5AP63241 154 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DPY19L1Q2PZI1 675 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 PIK3R6Q5UE93 754 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 AMIGO2Q86SJ2 522 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 LINGO1Q96FE5 620 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DIRAS2Q96HU8 199 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ACO2Q99798 780 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CIPCQ9C0C6 399 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ZDHHC6Q9H6R6 413 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ASB8Q9H765 288 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CFL2Q9Y281 166 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 LAMA4Q16363 1823 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 H6PDO95479 791 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 CYP2B6P20813 491 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ITPK1Q13572 414 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 C6orf52Q5T4I8 152 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 RNF44Q7L0R7 432 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 RASAL3Q86YV0 1011 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 THUMPD1Q9NXG2 353 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 SLIT2O94813 1529 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ELOVL7A1L3X0 281 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 E7ENX8 843 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 TIPRLO75663 272 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 SEMA3DO95025 777 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 SERPINA3P01011 423 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 FGBP02675 491 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 MYBL2P10244 700 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 BUD31P41223 144 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 LLGL2Q6P1M3 1020 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 DRICH1Q6PGQ1 229 aaPredicted RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 JAZF1Q86VZ6 243 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ERI1Q8IV48 349 aaKnown RBP7.62□□□□□ -1.19
SF3B3-201ENST00000302516 NMUR2Q9GZQ4 415 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 ABHD16BQ9H3Z7 469 aa7.62□□□□□ -1.19
SF3B3-201ENST00000302516 MCIDASD6RGH6 385 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ACSL4O60488 711 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 RPP40O75818 363 aaKnown RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 APOC1P02654 83 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 C9P02748 559 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 KIR3DL1P43629 444 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 GNPDA1P46926 289 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PPATQ06203 517 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 TUBA3EQ6PEY2 450 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CXorf40AQ8TE69 158 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SLC16A10Q8TF71 515 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FTHL17Q9BXU8 183 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 C3orf14Q9HBI5 128 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MEMO1Q9Y316 297 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 VWA7Q9Y334 891 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ANGPTL1O95841 491 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CBX5P45973 191 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 SLC39A12Q504Y0 691 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 EGFLAMQ63HQ2 1017 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 NPNTQ6UXI9 565 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MON1BQ7L1V2 547 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 STRADAQ7RTN6 431 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 KAZALD1Q96I82 304 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 NODALQ96S42 347 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MRIQ9BWK5 157 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MED11Q9P086 117 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ETS2P15036 469 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MARCKSL1P49006 195 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 ATP13A4Q4VNC1 1196 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FAM171A1Q5VUB5 890 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 FBXL19Q6PCT2 694 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 DCLRE1AQ6PJP8 1040 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 XKRXQ6PP77 449 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 NPAS2Q99743 824 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 MGAT4AQ9UM21 535 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PDE10AQ9Y233 779 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 CDC25CP30307 473 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 GALK1P51570 392 aa7.61□□□□□ -1.19
SF3B3-201ENST00000302516 PLEKHG6Q3KR16 790 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms