RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 NPAS3Q8IXF0 933 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 RYBPQ8N488 228 aaPredicted RBP11.96□□□□□ -0.49
TPM3-202ENST00000302206 HCAR2Q8TDS4 363 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 SMARCD2Q92925 531 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 SCRN2Q96FV2 425 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 THOC1Q96FV9 657 aaKnown RBP11.96□□□□□ -0.49
TPM3-202ENST00000302206 RPL10LQ96L21 214 aaKnown RBP11.96□□□□□ -0.49
TPM3-202ENST00000302206 ASB16Q96NS5 453 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 MCCC1Q96RQ3 725 aaPredicted RBP11.96□□□□□ -0.49
TPM3-202ENST00000302206 GATA5Q9BWX5 397 aaPredicted RBP11.96□□□□□ -0.49
TPM3-202ENST00000302206 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 ZFYVE1Q9HBF4 777 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 XPR1Q9UBH6 696 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 DNAJC16Q9Y2G8 782 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 CRYL1Q9Y2S2 319 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 SLC30A1Q9Y6M5 507 aa11.96□□□□□ -0.49
TPM3-202ENST00000302206 DOCK6Q96HP0 2047 aa11.96□□□□□ -0.5
TPM3-202ENST00000302206 ZNF106Q9H2Y7 1883 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 TRBV5-4A0A0C4DH59 114 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CFAP73A6NFT4 308 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 ANKRD65E5RJM6 399 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CCDC22O60826 627 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 NFATC1O95644 943 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 HSPA4LO95757 839 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 ESR1P03372 595 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 PYGLP06737 847 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CCDC166P0CW27 439 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 PKMP14618 531 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 CTPS1P17812 591 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.5
TPM3-202ENST00000302206 NNMTP40261 264 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CCNHP51946 323 aaPredicted RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 POLR2LP62875 67 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 RCN2Q14257 317 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CSHL1Q14406 222 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CBX2Q14781 532 aaPredicted RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 KRT72Q14CN4 511 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 SPRED3Q2MJR0 410 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 GPR33Q49SQ1 333 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 FAM78AQ5JUQ0 283 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 TMC5Q6UXY8 1006 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 TPRG1Q6ZUI0 275 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 USP45Q70EL2 814 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 PIWIL4Q7Z3Z4 852 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 GPR149Q86SP6 731 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 SLC22A9Q8IVM8 553 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 KIRREL3Q8IZU9 778 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 C12orf76Q8N812 135 aaPredicted RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 KDM1BQ8NB78 822 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 RHEBL1Q8TAI7 183 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 BPIFB1Q8TDL5 484 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 GDPD5Q8WTR4 605 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 ERP27Q96DN0 273 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 MRPL38Q96DV4 380 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 RSPRY1Q96DX4 576 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 LRIG1Q96JA1 1093 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 MRGPRX3Q96LB0 322 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 LRRC3BQ96PB8 259 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 SMIM14Q96QK8 99 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 TTC1Q99614 292 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 TFB2MQ9H5Q4 396 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 UBE2ZQ9H832 354 aaPredicted RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 DNAJC28Q9NX36 388 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 TAS2R13Q9NYV9 303 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 LMCD1Q9NZU5 365 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 CPSF2Q9P2I0 782 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 HEY2Q9UBP5 337 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 ZFP69BQ9UJL9 534 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 SORCS3Q9UPU3 1222 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 RAP2CQ9Y3L5 183 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 PCDHB1Q9Y5F3 818 aa11.95□□□□□ -0.5
TPM3-202ENST00000302206 OAS3Q9Y6K5 1087 aaKnown RBP11.95□□□□□ -0.5
TPM3-202ENST00000302206 KIF26AQ9ULI4 1882 aaPredicted RBP11.94□□□□□ -0.5
TPM3-202ENST00000302206 C1orf232A0A0U1RR37 186 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 SLCO1B7G3V0H7 640 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 VPS26AO75436 327 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 LYPLA1O75608 230 aaPredicted RBP11.94□□□□□ -0.5
TPM3-202ENST00000302206 SRP72O76094 671 aaKnown RBP11.94□□□□□ -0.5
TPM3-202ENST00000302206 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 UNC5CO95185 931 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 ALPIP09923 528 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 CD1DP15813 335 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 ZNF37AP17032 561 aaPredicted RBP11.94□□□□□ -0.5
TPM3-202ENST00000302206 NFKBIAP25963 317 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
TPM3-202ENST00000302206 GLRBP48167 497 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 DGKGP49619 791 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 AQP5P55064 265 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 ATP6V0D1P61421 351 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 NCALDP61601 193 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 NFKB2Q00653 900 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 ZBTB16Q05516 673 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 PRKAA1Q13131 559 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
TPM3-202ENST00000302206 TBCCQ15814 346 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms