RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PARP15Q460N3 678 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 CCSAPQ6IQ19 270 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 AHI1Q8N157 1196 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 MYO1HQ8N1T3 1032 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 CATSPER1Q8NEC5 780 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TUBGCP3Q96CW5 907 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 CDKN2AIPNLQ96HQ2 116 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 ZFRQ96KR1 1074 aaKnown RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 ZBED2Q9BTP6 218 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TLR8Q9NR97 1041 aaKnown RBP12.86□□□□□ -0.35
HIF3A-204ENST00000300862 TMEM181Q9P2C4 612 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 MAP10Q9P2G4 905 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 SARDHQ9UL12 918 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 DMTF1Q9Y222 760 aa12.86□□□□□ -0.35
HIF3A-204ENST00000300862 AZIN1O14977 448 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 C8BP07358 591 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 CAPN3P20807 821 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 TACR2P21452 398 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 EEF1DP29692 281 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 EMP3P54852 163 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 RPS24P62847 133 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 SAPCD2Q86UD0 394 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 RBM12BQ8IXT5 1001 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 DCBLD1Q8N8Z6 715 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 TTC16Q8NEE8 873 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 OR4K2Q8NGD2 314 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 BRSK1Q8TDC3 778 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 CANT1Q8WVQ1 401 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 ATOH8Q96SQ7 321 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 NMRK2Q9NPI5 230 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 PLK2Q9NYY3 685 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 CIDEBQ9UHD4 219 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 VWA8A3KMH1 1905 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 CDC7O00311 574 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 PFDN1O60925 122 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 VNN2O95498 520 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 FGF1P05230 155 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 SERPINF2P08697 491 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 HGFP14210 728 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 UGT1A6P19224 532 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 HLA-DPA1P20036 260 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 ATP6V1B2P21281 511 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 PRDX3P30048 256 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 PSMD8P48556 350 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 AGTR2P50052 363 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 APLP1P51693 650 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 STC1P52823 247 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 ACVR1Q04771 509 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 TSNQ15631 228 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 HMBOX1Q6NT76 420 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 GALNT7Q86SF2 657 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 TMEM126BQ8IUX1 230 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 FATE1Q969F0 183 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 FEM1CQ96JP0 617 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 RPL10LQ96L21 214 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 SLC30A3Q99726 388 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 AARSD1Q9BTE6 412 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 TSR3Q9UJK0 312 aaKnown RBP12.85□□□□□ -0.35
HIF3A-204ENST00000300862 MED16Q9Y2X0 877 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 GREB1Q4ZG55 1949 aa12.85□□□□□ -0.35
HIF3A-204ENST00000300862 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 NME4O00746 187 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 ENPP3O14638 875 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 TPST1O60507 370 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 FAM58BPP0C7Q3 252 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 PAX3P23760 479 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 DIO3P55073 304 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 FCGRTP55899 365 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 IKBKEQ14164 716 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 SETMARQ53H47 684 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 SAMD4BQ5PRF9 694 aaKnown RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 C1QTNF12Q5T7M4 302 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 RAB44Q7Z6P3 723 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 DHFR2Q86XF0 187 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 GRIN3AQ8TCU5 1115 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 DIS3LQ8TF46 1054 aaKnown RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 IL37Q9NZH6 218 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 CNOT6Q9ULM6 557 aaKnown RBP12.84□□□□□ -0.35
HIF3A-204ENST00000300862 RNF112Q9ULX5 631 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 AURKCQ9UQB9 309 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 RNF11Q9Y3C5 154 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 FAM149AA5PLN7 773 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 F5H5T6 163 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 GPR39O43194 453 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 OR1I1O60431 355 aa12.84□□□□□ -0.35
HIF3A-204ENST00000300862 EOMESO95936 686 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms