RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SPO11Q9Y5K1 396 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 PPP6CO00743 305 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 PGM3O95394 542 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 PENKP01210 267 aaPredicted RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 S100BP04271 92 aaPredicted RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 SLC6A4P31645 630 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 TTPAP49638 278 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 IL2P60568 153 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 MRPL58Q14197 206 aaKnown RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 TAF1AQ15573 450 aaPredicted RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 VPS26BQ4G0F5 336 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 PITRM1Q5JRX3 1037 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 LINGO4Q6UY18 593 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 DNAH12Q6ZR08 3092 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 RHEBL1Q8TAI7 183 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 NLE1Q9NVX2 485 aaPredicted RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 HACD3Q9P035 362 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 AK5Q9Y6K8 562 aa13.56□□□□□ -0.24
CDH8-201ENST00000299345 TDRD15B5MCY1 1934 aaKnown RBP13.56□□□□□ -0.24
CDH8-201ENST00000299345 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 CLPTM1O96005 669 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 IGLV3-27P01718 113 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 GALTP07902 379 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 KCNK10P57789 538 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 BTG3Q14201 252 aaPredicted RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 AARS2Q5JTZ9 985 aaKnown RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDH8-201ENST00000299345 EFL1Q7Z2Z2 1120 aaKnown RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 KIAA1191Q96A73 305 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 KLHL32Q96NJ5 620 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 CYP2S1Q96SQ9 504 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 RAB26Q9ULW5 256 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 PTGDR2Q9Y5Y4 395 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 NPEPPSL1A6NEC2 478 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 DNAJA2O60884 412 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 KERAO60938 352 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 CA8P35219 290 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 GRIA3P42263 894 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 ACADVLP49748 655 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 RHOAP61586 193 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 CYTH1Q15438 398 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 SCIMPQ6UWF3 145 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 GPSM1Q86YR5 675 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 NPAS4Q8IUM7 802 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 PHC3Q8NDX5 983 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 SH3RF2Q8TEC5 729 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 C3orf30Q96M34 536 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 MGME1Q9BQP7 344 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 A0A1B0GVM2 712 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 ZNF839A8K0R7 811 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 ARVCFO00192 962 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 CDC7O00311 574 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 KDELR3O43731 214 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 RNASEH2AO75792 299 aaKnown RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 FESP07332 822 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 IL10P22301 178 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 RPL26P61254 145 aaKnown RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 ACVR1Q04771 509 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 PLD1Q13393 1074 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 LRP8Q14114 963 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 INPP5AQ14642 412 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 TLR1Q15399 786 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 C6orf52Q5T4I8 152 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 AMIGO2Q86SJ2 522 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 TMEM126BQ8IUX1 230 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 HERC6Q8IVU3 1022 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 CD99L2Q8TCZ2 262 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 ELAC1Q9H777 363 aaKnown RBP13.55□□□□□ -0.24
CDH8-201ENST00000299345 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
CDH8-201ENST00000299345 ILVBLA1L0T0 632 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 LCHNA4D1U4 455 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 PRORSD1PA6NEY8 169 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 BBIP1A8MTZ0 92 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 H3BMM5 538 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 FBP2O00757 339 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 TPST1O60507 370 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 VPS4BO75351 444 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 ECI2O75521 394 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 BAIAP3O94812 1187 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 C1RP00736 705 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 PSMC3P17980 439 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 CES1P23141 567 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 RGRP47804 291 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 NFKB2Q00653 900 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 RHDQ02161 417 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 LRTOMTQ8WZ04 291 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 ACOT8O14734 319 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 TNFAIP8O95379 198 aa13.54□□□□□ -0.24
CDH8-201ENST00000299345 FAM58BPP0C7Q3 252 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms