RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 TRIP4Q15650 581 aaPredicted RBP13.49□□□□□ -0.25
TTC39B-201ENST00000297615 PIGGQ5H8A4 983 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 APCDD1Q8J025 514 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 LZTR1Q8N653 840 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 LMNTD1Q8N9Z9 388 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 OR4L1Q8NH43 312 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 LPGAT1Q92604 370 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 CDKN2AIPNLQ96HQ2 116 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 BOCQ9BWV1 1114 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 LZTS1Q9Y250 596 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 TRAF6Q9Y4K3 522 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 ACSL4O60488 711 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 GRIA3P42263 894 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 DIO3P55073 304 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 GPR17Q13304 367 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 TSTA3Q13630 321 aaPredicted RBP13.49□□□□□ -0.25
TTC39B-201ENST00000297615 DBN1Q16643 649 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 GSTA3Q16772 222 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 METTL21CQ5VZV1 264 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 SPPL2BQ8TCT7 592 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 SEPT8Q92599 483 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 CAAP1Q9H8G2 361 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 NSMCE4AQ9NXX6 385 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 DNMT3LQ9UJW3 386 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 AGO1Q9UL18 857 aaKnown RBP13.49□□□□□ -0.25
TTC39B-201ENST00000297615 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 RAI2Q9Y5P3 530 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 CROCCQ5TZA2 2017 aa13.49□□□□□ -0.25
TTC39B-201ENST00000297615 CHD9Q3L8U1 2897 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 E5RI56 91 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 ATP5BP06576 529 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 HECTD3Q5T447 861 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 DNAJC14Q6Y2X3 702 aaPredicted RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 MBOAT1Q6ZNC8 495 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 RBM44Q6ZP01 1051 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 MILR1Q7Z6M3 343 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 ISCA2Q86U28 154 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 CDYL2Q8N8U2 506 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 DNAJB14Q8TBM8 379 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 SLC22A17Q8WUG5 538 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 CLSTN3Q9BQT9 956 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 GPR63Q9BZJ6 419 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 ZNHIT2Q9UHR6 403 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 RNF112Q9ULX5 631 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 PRORSD1PA6NEY8 169 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 TRPC5OSA6NMA1 111 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 TARM1B6A8C7 271 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 KIF3CO14782 793 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 CLPTM1O96005 669 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 MC4RP32245 332 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 BIRC2Q13490 618 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 CDH18Q13634 790 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 RBBP7Q16576 425 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 AP1ARQ63HQ0 302 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 MSANTD2Q6P1R3 559 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 PGAM4Q8N0Y7 254 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 UMODL1-AS1Q8N2C9 162 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 SORCS1Q8WY21 1168 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 ISL2Q96A47 359 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 TMEM169Q96HH4 297 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 SPATA16Q9BXB7 569 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 VPS45Q9NRW7 570 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 CATSPERZQ9NTU4 200 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 HACD3Q9P035 362 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 STX7O15400 261 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 H2AFYO75367 372 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 STC2O76061 302 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 FESP07332 822 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 SLC11A2P49281 568 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 RHOAP61586 193 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 NRG1Q02297 640 aaPredicted RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 PPP1R8Q12972 351 aaKnown RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 CMPK2Q5EBM0 449 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 REP15Q6BDI9 236 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 ZBTB46Q86UZ6 589 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 UROC1Q96N76 676 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 COQ10BQ9H8M1 238 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 POLR3BQ9NW08 1133 aaPredicted RBP13.48□□□□□ -0.25
TTC39B-201ENST00000297615 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 HCFC1R1Q9NWW0 138 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 TRPM5Q9NZQ8 1165 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 VTI1BQ9UEU0 232 aa13.48□□□□□ -0.25
TTC39B-201ENST00000297615 SCN4AP35499 1836 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 A0A1W2PRU2 124 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF840PA6NDX5 716 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 PDLIM1O00151 329 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 PIP5K1BO14986 540 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 AHCYL1O43865 530 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 CLIC3O95833 236 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 HOXD9P28356 352 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-201ENST00000297615 VEGFBP49765 207 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 STX1BP61266 288 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 EIF4EBP2Q13542 120 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-201ENST00000297615 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-201ENST00000297615 TECRLQ5HYJ1 363 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms