RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 NPIPB15A6NHN6 443 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 TARM1B6A8C7 271 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 CLDN7O95471 211 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 SLC6A11P48066 632 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 TTPAP49638 278 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 CDKN1CP49918 316 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.07
LSM6-201ENST00000296581 CACNG1Q06432 222 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 STX3Q13277 289 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 AARS2Q5JTZ9 985 aaKnown RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 GRAMD4Q6IC98 578 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 LRRC8EQ6NSJ5 796 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 TPRG1Q6ZUI0 275 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 TBC1D1Q86TI0 1168 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 CBARPQ8N350 705 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 FSTL5Q8N475 847 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 EZH1Q92800 747 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 UBXN10Q96LJ8 280 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 GPAMQ9HCL2 828 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 DEC1Q9P2X7 70 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 NDUFS3O75489 264 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 SERPINE1P05121 402 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 KPNA2P52292 529 aaKnown RBP15.48■□□□□ 0.07
LSM6-201ENST00000296581 MESP2Q0VG99 397 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 ZRANB3Q5FWF4 1079 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 CES5AQ6NT32 575 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 CRTC1Q6UUV9 634 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 ZYG11AQ6WRX3 759 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 USP45Q70EL2 814 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 ST13P5Q8NFI4 369 aaPredicted RBP15.48■□□□□ 0.07
LSM6-201ENST00000296581 ZNF398Q8TD17 642 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 NXPE3Q969Y0 559 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 TSPAN11A1L157 253 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 PRRT4C9JH25 899 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 GAPDHSO14556 408 aaPredicted RBP15.48■□□□□ 0.07
LSM6-201ENST00000296581 PFDN6O15212 129 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 DNAJC6O75061 913 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 TROVE2P10155 538 aaKnown RBP eCLIP15.48■□□□□ 0.07
LSM6-201ENST00000296581 SP100P23497 879 aaPredicted RBP15.48■□□□□ 0.07
LSM6-201ENST00000296581 GRK2P25098 689 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 EIF4HQ15056 248 aaKnown RBP15.48■□□□□ 0.07
LSM6-201ENST00000296581 BRAT1Q6PJG6 821 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 TMEM207Q6UWW9 146 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 ZCCHC23Q6ZST2 131 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 PHTF2Q8N3S3 785 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 KDM1BQ8NB78 822 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 PPP1R14CQ8TAE6 165 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 GRIN3AQ8TCU5 1115 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 HEXDCQ8WVB3 486 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 C10orf82Q8WW14 230 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 LRIG1Q96JA1 1093 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 KLHL32Q96NJ5 620 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 PLA2G2FQ9BZM2 168 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 ZNF576Q9H609 170 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 BRD9Q9H8M2 597 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 THAP1Q9NVV9 213 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 SLC30A1Q9Y6M5 507 aa15.48■□□□□ 0.07
LSM6-201ENST00000296581 TK2O00142 265 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 TBX10O75333 385 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 LTA4HP09960 611 aaKnown RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 RALBP11234 206 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 SCTRP47872 440 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 PTPN5P54829 565 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 POLR2LP62875 67 aaKnown RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 OVGP1Q12889 678 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 FAM83EQ2M2I3 478 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CTC1Q2NKJ3 1217 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 TSPAN33Q86UF1 283 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CPA6Q8N4T0 437 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 ELSPBP1Q96BH3 223 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 SCYL1Q96KG9 808 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 MRPL57Q9BQC6 102 aaKnown RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 TRIM55Q9BYV6 548 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 FAM96AQ9H5X1 160 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 XPR1Q9UBH6 696 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 APPL1Q9UKG1 709 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CCT8L1PA6NM43 557 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 LIN7AO14910 233 aaPredicted RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 SRP72O76094 671 aaKnown RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 MYL2P10916 166 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 BPIP17213 487 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CD9P21926 228 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 GLRBP48167 497 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 ADARP55265 1226 aaKnown RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 ST8SIA6P61647 398 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 RUNX3Q13761 415 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CSHL1Q14406 222 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 AGAP9Q5VTM2 703 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CERS6Q6ZMG9 384 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 PIM3Q86V86 326 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 ANKRD49Q8WVL7 239 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 CCT6BQ92526 530 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 BIRC8Q96P09 236 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 OSBPL1AQ9BXW6 950 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 C20orf27Q9GZN8 174 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 MRPL46Q9H2W6 279 aaKnown RBP15.47■□□□□ 0.07
LSM6-201ENST00000296581 NPHS2Q9NP85 383 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 IL26Q9NPH9 171 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 OXSMQ9NWU1 459 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms