RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CD84Q9UIB8 345 aa17.72■□□□□ 0.43
CCDC78-201ENST00000293889 CYP8B1Q9UNU6 501 aa17.72■□□□□ 0.43
CCDC78-201ENST00000293889 SCN8AQ9UQD0 1980 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 PRR23AA6NEV1 266 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 IGLON5A6NGN9 336 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 H7C0S8 307 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 GAPDHSO14556 408 aaPredicted RBP17.71■□□□□ 0.43
CCDC78-201ENST00000293889 GOT2P00505 430 aaKnown RBP17.71■□□□□ 0.43
CCDC78-201ENST00000293889 SHBGP04278 402 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 SP9P0CG40 484 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 XIAPP98170 497 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 PEX6Q13608 980 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 HSP90AA5PQ58FG0 334 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 SEL1L3Q68CR1 1132 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 PDPK2PQ6A1A2 396 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 TTC19Q6DKK2 380 aaPredicted RBP17.71■□□□□ 0.43
CCDC78-201ENST00000293889 OR2W6PQ8NHA6 318 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 BTBD1Q9H0C5 482 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 KDM4CQ9H3R0 1056 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 ACSS3Q9H6R3 686 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 SGK2Q9HBY8 427 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 SMYD2Q9NRG4 433 aa17.71■□□□□ 0.43
CCDC78-201ENST00000293889 ZFR2Q9UPR6 939 aaKnown RBP17.71■□□□□ 0.43
CCDC78-201ENST00000293889 MUC6Q6W4X9 2439 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3DA0A087WVF3 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3IA0A087WXS9 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3EA0A087X179 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3KA0A087X1G2 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 RGSL1A5PLK6 1076 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 GMNCA6NCL1 334 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3FA6NER0 549 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 FAM47DPA6NHR8 397 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 FAM159BA6NKW6 160 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 CXorf49A8MYA2 514 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3LB9A6J9 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 WNT9AO14904 365 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 LZTS3O60299 673 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 RNGTTO60942 597 aaKnown RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 RECQL5O94762 991 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 FSBPO95073 299 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3HP0C7X1 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 HOXA6P31267 233 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 MC4RP32245 332 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 SPAM1P38567 509 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 CREB5Q02930 508 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 MGAT5Q09328 741 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 EFTUD2Q15029 972 aaKnown RBP eCLIP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 KBTBD12Q3ZCT8 623 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3GQ6DHY5 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3CQ6IPX1 549 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 FAM151BQ6UXP7 276 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 TBC1D3Q8IZP1 549 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 OR4L1Q8NH43 312 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 RLN3Q8WXF3 142 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 NELL1Q92832 810 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 DTD2Q96FN9 168 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 PLEKHG4BQ96PX9 1271 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 IARS2Q9NSE4 1012 aaKnown RBP17.7■□□□□ 0.42
CCDC78-201ENST00000293889 LRRK1Q38SD2 2015 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 CACNA1HO95180 2353 aa17.7■□□□□ 0.42
CCDC78-201ENST00000293889 A0A1W2PQU0 124 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 ZNF217O75362 1048 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 OXTRP30559 389 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 FNTBP49356 437 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 PTPN5P54829 565 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 RPS21P63220 83 aaKnown RBP17.69■□□□□ 0.42
CCDC78-201ENST00000293889 THOC5Q13769 683 aaKnown RBP17.69■□□□□ 0.42
CCDC78-201ENST00000293889 CHRNA6Q15825 494 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 TMEM259Q4ZIN3 620 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 TNFAIP8L3Q5GJ75 292 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 ZDHHC20Q5W0Z9 365 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 KIAA1161Q6NSJ0 714 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 NEPROQ6NW34 567 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 ZNF449Q6P9G9 518 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 AFTPHQ6ULP2 937 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 HORMAD1Q86X24 394 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 RAVER1Q8IY67 606 aaKnown RBP17.69■□□□□ 0.42
CCDC78-201ENST00000293889 NRSN1Q8IZ57 195 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 FRMD1Q8N878 549 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 OR2T34Q8NGX1 318 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 SCAMP4Q969E2 229 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 CYTH2Q99418 400 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 AGAP2Q99490 1192 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 ABCG8Q9H221 673 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 FAM83DQ9H4H8 585 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 SLC17A6Q9P2U8 582 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 PLXND1Q9Y4D7 1925 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 GLYATL1P3A0A0U1RQE8 302 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 TM7SF2O76062 418 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 SRP72O76094 671 aaKnown RBP17.69■□□□□ 0.42
CCDC78-201ENST00000293889 PRSS56P0CW18 603 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 DCDC1P59894 354 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 PPP2CBP62714 309 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 PPP2CAP67775 309 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 MAP7D1Q3KQU3 841 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 ZNF528Q3MIS6 628 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 KRT71Q3SY84 523 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 TEDDM1Q5T9Z0 273 aa17.69■□□□□ 0.42
CCDC78-201ENST00000293889 NEK5Q6P3R8 708 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms