RNA–Protein interactions for RNA: ENST00000291074.9

VPS53-201, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-201ENST00000291074 NCF1BA6NI72 391 aaPredicted RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 NCF1CA8MVU1 366 aaPredicted RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 C9JVG2 144 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 TRIM38O00635 465 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 CLASP2O75122 1294 aaKnown RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 CD160O95971 181 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 SNRPB2P08579 225 aaKnown RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 NCF1P14598 390 aaPredicted RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 EEF1DP29692 281 aaKnown RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 TRAF2Q12933 501 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 MAPRE2Q15555 327 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 ADGRF1Q5T601 910 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 FBXL19Q6PCT2 694 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 RAB44Q7Z6P3 723 aaPredicted RBP19.99■□□□□ 0.79
VPS53-201ENST00000291074 TTC16Q8NEE8 873 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 RHEBL1Q8TAI7 183 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 TWIST2Q8WVJ9 160 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 TAS2R13Q9NYV9 303 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 RIMS3Q9UJD0 308 aa19.99■□□□□ 0.79
VPS53-201ENST00000291074 MICAL3Q7RTP6 2002 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 MRASO14807 208 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 NIPSNAP2O75323 286 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 VCLP18206 1134 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 MC4RP32245 332 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 GRB7Q14451 532 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 FOXB2Q5VYV0 432 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 FUNDC1Q8IVP5 155 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 TUBB1Q9H4B7 451 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 SEMA4BQ9NPR2 832 aaPredicted RBP19.98■□□□□ 0.79
VPS53-201ENST00000291074 C2orf81A6NN90 581 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 AZIN1O14977 448 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 KERAO60938 352 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 ECI2O75521 394 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 TMCC1O94876 653 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 C1RP00736 705 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 MZF1P28698 734 aaPredicted RBP19.98■□□□□ 0.79
VPS53-201ENST00000291074 ECT2LQ008S8 904 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 ADGRE1Q14246 886 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 DDIASQ8IXT1 998 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 BHMTQ93088 406 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 KIAA1191Q96A73 305 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 DCUN1D1Q96GG9 259 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 BIRC8Q96P09 236 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 PKP2Q99959 881 aa19.98■□□□□ 0.79
VPS53-201ENST00000291074 GMPR2Q9P2T1 348 aaKnown RBP19.98■□□□□ 0.79
VPS53-201ENST00000291074 PITPNM1O00562 1244 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 EFEMP2O95967 443 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 BMP1P13497 986 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 PEX19P40855 299 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 MED21Q13503 144 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 KIF19Q2TAC6 998 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 KLHDC10Q6PID8 442 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 FBXO39Q8N4B4 442 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 SIDT2Q8NBJ9 832 aaKnown RBP19.97■□□□□ 0.79
VPS53-201ENST00000291074 LRGUKQ96M69 825 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 DERL2Q9GZP9 239 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 UNC93B1Q9H1C4 597 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 TBC1D30Q9Y2I9 924 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 PRORSD1PA6NEY8 169 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 LPOP22079 712 aaPredicted RBP19.97■□□□□ 0.79
VPS53-201ENST00000291074 AGTR2P50052 363 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 ATN1P54259 1190 aaPredicted RBP19.97■□□□□ 0.79
VPS53-201ENST00000291074 TAF12Q16514 161 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 ICA1LQ8NDH6 482 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 SYTL2Q9HCH5 934 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 AFF4Q9UHB7 1163 aaKnown RBP19.97■□□□□ 0.79
VPS53-201ENST00000291074 YIPF1Q9Y548 306 aa19.97■□□□□ 0.79
VPS53-201ENST00000291074 ANKRD66B4E2M5 251 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 BTN3A1O00481 513 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 PEX1O43933 1283 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 NRP2O60462 931 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 DNAJA2O60884 412 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 LINC00032P0C843 101 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 GPX3P22352 226 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 XIAPP98170 497 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 RAD51Q06609 339 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 ZRANB3Q5FWF4 1079 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 PITRM1Q5JRX3 1037 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 KANK2Q63ZY3 851 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 CHST9Q7L1S5 443 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 CARNMT1Q8N4J0 409 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 STAG3L4Q8TBR4 150 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 NAT14Q8WUY8 206 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 OVCA2Q8WZ82 227 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 ESAMQ96AP7 390 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 IGSF21Q96ID5 467 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 SLC22A12Q96S37 553 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 SLC25A23Q9BV35 468 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 KLF16Q9BXK1 252 aaPredicted RBP19.96■□□□□ 0.79
VPS53-201ENST00000291074 CWH43Q9H720 699 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 ARIH1Q9Y4X5 557 aaPredicted RBP19.96■□□□□ 0.79
VPS53-201ENST00000291074 BACE2Q9Y5Z0 518 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 PRSS51A0A1B0GVH4 220 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 LCHNA4D1U4 455 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 FOLH1Q04609 750 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 CLCQ05315 142 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 CTSL3PQ5NE16 218 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 ZFP1Q6P2D0 407 aa19.96■□□□□ 0.79
VPS53-201ENST00000291074 TMCO2Q7Z6W1 182 aaPredicted RBP19.96■□□□□ 0.79
VPS53-201ENST00000291074 RETREG3Q86VR2 466 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms