RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FAM92AA1XBS5 289 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ALDH1A2O94788 518 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ECDO95905 644 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 PORP16435 677 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 TMBIM6P55061 237 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 SCRN3Q0VDG4 424 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 HKDC1Q2TB90 917 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ERAP2Q6P179 960 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 CNSTQ6PJW8 725 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ZNF671Q8TAW3 534 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 SENP8Q96LD8 212 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ADAM2Q99965 735 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ALG2Q9H553 416 aa17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 CCDC177Q9NQR7 707 aaPredicted RBP17.48■□□□□ 0.39
PCDHA13-201ENST00000289272 ANXA5P08758 320 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 ATF6P18850 670 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 PLK1P53350 603 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 EEFSECP57772 596 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 TNS4Q8IZW8 715 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 ATL1Q8WXF7 558 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 UNKQ9C0B0 810 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 ZNF696Q9H7X3 374 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SFMBT1Q9UHJ3 866 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 CNOT11Q9UKZ1 510 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 ISPDA4D126 451 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 B4GALT5O43286 388 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 ULK1O75385 1050 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 CLPXO76031 633 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 KLRC2P26717 231 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 FEN1P39748 380 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 POLR2JP52435 117 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 HSF2Q03933 536 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SLC18A2Q05940 514 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 FBXO43Q4G163 708 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 NIPA2Q8N8Q9 360 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 JOSD2Q8TAC2 188 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 LENG9Q96B70 501 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 FAM136AQ96C01 138 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 DNAJB9Q9UBS3 223 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 NOCTQ9UK39 431 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 VPS4AQ9UN37 437 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 MAN2B2Q9Y2E5 1009 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SLC9A3R1O14745 358 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 KPNA5O15131 536 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 MDM4O15151 490 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 FADS2O95864 444 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 USP17L7P0C7H9 530 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 RAP2AP10114 183 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 STARP49675 285 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 PUDPQ08623 228 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 STARD3Q14849 445 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 CA9Q16790 459 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 PPM1LQ5SGD2 360 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 GPR180Q86V85 440 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SLC22A4Q9H015 551 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SPEF1Q9Y4P9 236 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SH3PXD2BA1X283 911 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SUV39H1O43463 412 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 SGTAO43765 313 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 RALGPS1Q5JS13 557 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 CDCA2Q69YH5 1023 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 TLDC1Q6P9B6 456 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 KLHL1Q9NR64 748 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
PCDHA13-201ENST00000289272 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 B4GALT4O60513 344 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 CAPN15O75808 1086 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 ITGAXP20702 1163 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 RCVRNP35243 200 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 PTPN20Q4JDL3 420 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 TMPRSS11AQ6ZMR5 421 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 GLT6D1Q7Z4J2 308 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 PHF10Q8WUB8 498 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 RDH12Q96NR8 316 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 CITED4Q96RK1 184 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 WDR55Q9H6Y2 383 aaPredicted RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 RPS6KB2Q9UBS0 482 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 CFL2Q9Y281 166 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 LRRC37A3O60309 1634 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 FKTNO75072 461 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 LIPEQ05469 1076 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 FAM110CQ1W6H9 321 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 DEFB115Q30KQ5 88 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 GCNT7Q6ZNI0 430 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 DPF3Q92784 378 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 EFHD2Q96C19 240 aaPredicted RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 SERAC1Q96JX3 654 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 CRISPLD1Q9H336 500 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 EGFL7Q9UHF1 273 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 GIT1Q9Y2X7 761 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 NOTOA8MTQ0 251 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 NELFEP18615 380 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 OR2B6P58173 313 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 SRP54P61011 504 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 ACAP2Q15057 778 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 R3HCC1LQ7Z5L2 792 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 OR5K1Q8NHB7 308 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 CHCHD6Q9BRQ6 235 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms