RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SNAP91O60641 907 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 IPO13O94829 963 aaKnown RBP11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SUPT7LO94864 414 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 STAU1O95793 577 aaKnown RBP11.32□□□□□ -0.6
SCLT1-201ENST00000281142 IL10P22301 178 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 AXLP30530 894 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 CA8P35219 290 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 RCVRNP35243 200 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 HADHAP40939 763 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 OPRL1P41146 370 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SEPT6Q14141 434 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 RGS21Q2M5E4 152 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 FUT11Q495W5 492 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 FBXO48Q5FWF7 155 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 PKN3Q6P5Z2 889 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 OR13F1Q8NGS4 319 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 DNAJB14Q8TBM8 379 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 STON2Q8WXE9 905 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 MYRFLQ96LU7 910 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TEKT5Q96M29 485 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 MUS81Q96NY9 551 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 C9orf16Q9BUW7 83 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 FICDQ9BVA6 458 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 LHPPQ9H008 270 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TLR9Q9NR96 1032 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 GIN1Q9NXP7 522 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SMPD3Q9NY59 655 aaPredicted RBP11.32□□□□□ -0.6
SCLT1-201ENST00000281142 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 ALPK3Q96L96 1907 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 MAGEB16A2A368 324 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TRIM64BA6NI03 449 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
SCLT1-201ENST00000281142 DAB1O75553 588 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 CD4P01730 458 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
SCLT1-201ENST00000281142 CPB1P15086 417 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SLC6A2P23975 617 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SNX16P57768 344 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SNX17Q15036 470 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TRIM71Q2Q1W2 868 aaKnown RBP11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 SMUG1Q53HV7 270 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 PACRGLQ8N7B6 248 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TMEM40Q8WWA1 233 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TAMM41Q96BW9 452 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 TMEM74Q96NL1 305 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 RIC8BQ9NVN3 520 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 KLK14Q9P0G3 267 aa11.32□□□□□ -0.6
SCLT1-201ENST00000281142 H3BMM5 538 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 TOR1BO14657 336 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 BCL10O95999 233 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 CTSHP09668 335 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 GFAPP14136 432 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 IL7RP16871 459 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 NAT1P18440 290 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 S100A1P23297 94 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 AKAP5P24588 427 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 THPOP40225 353 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
SCLT1-201ENST00000281142 SLC12A2P55011 1212 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 DNAJB13P59910 316 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 ATP6V0D1P61421 351 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 AQP6Q13520 282 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 INPP5AQ14642 412 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 SPCS2Q15005 226 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 VPS33AQ96AX1 596 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 C19orf60Q96EN9 201 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 OSMRQ99650 979 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 HGH1Q9BTY7 390 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 ALG9Q9H6U8 611 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
SCLT1-201ENST00000281142 SLAMF8Q9P0V8 285 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 GNPTGQ9UJJ9 305 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 HUS1O60921 280 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 PMPCBO75439 489 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 SIX3O95343 332 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-201ENST00000281142 CHRNA1P02708 482 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 RPL34P49207 117 aaKnown RBP11.31□□□□□ -0.6
SCLT1-201ENST00000281142 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 DENND5AQ6IQ26 1287 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 TMEM207Q6UWW9 146 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 PIM3Q86V86 326 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 OSTM1Q86WC4 334 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 TRPV3Q8NET8 790 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 ZUFSPQ96AP4 578 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 FEM1CQ96JP0 617 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 ABCD2Q9UBJ2 740 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 FBXO5Q9UKT4 447 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
SCLT1-201ENST00000281142 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms