RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 NFATC3Q12968 1075 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 IFI16Q16666 785 aaKnown RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 ZNF765Q7L2R6 523 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 LUZP1Q86V48 1076 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 ZNF761Q86XN6 746 aaPredicted RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 FAM129CQ86XR2 697 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 CBARPQ8N350 705 aaPredicted RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 MAML1Q92585 1016 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 SYN2Q92777 582 aaPredicted RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 AHCYL2Q96HN2 611 aaKnown RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 ZNF830Q96NB3 372 aaPredicted RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 ZNF670Q9BS34 389 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 STN1Q9H668 368 aaKnown RBP12.69□□□□□ -0.38
CD44-203ENST00000278386 CBX8Q9HC52 389 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 RBM22Q9NW64 420 aaKnown RBP eCLIP12.69□□□□□ -0.38
CD44-203ENST00000278386 CTTNBP2NLQ9P2B4 639 aa12.69□□□□□ -0.38
CD44-203ENST00000278386 TRBV23OR9-2A0A075B6M9 112 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 IGHV1OR21-1A0A087WYE8 117 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 C1orf232A0A0U1RR37 186 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 SYCE3A1L190 88 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 MATN3O15232 486 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 PPM1DO15297 605 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 DUX1O43812 170 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 CLDN7O95471 211 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 THRAP10827 490 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 IL4RP24394 825 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 CD1CP29017 333 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 STC1P52823 247 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 LIMK2P53671 638 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 PTSQ03393 145 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 TRA2AQ13595 282 aaKnown RBP eCLIP12.68□□□□□ -0.38
CD44-203ENST00000278386 LRP8Q14114 963 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 PAFAH1B3Q15102 231 aaKnown RBP12.68□□□□□ -0.38
CD44-203ENST00000278386 ATP13A4Q4VNC1 1196 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 ZNF574Q6ZN55 896 aaPredicted RBP12.68□□□□□ -0.38
CD44-203ENST00000278386 CPNE8Q86YQ8 564 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 AGBL5Q8NDL9 886 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 OR4D9Q8NGE8 314 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 EXD1Q8NHP7 514 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 SLC37A2Q8TED4 501 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 LRRN4Q8WUT4 740 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 CTNNBL1Q8WYA6 563 aaPredicted RBP12.68□□□□□ -0.38
CD44-203ENST00000278386 ART4Q93070 314 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 PMEPA1Q969W9 287 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 IQCDQ96DY2 449 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 TAAR9Q96RI9 348 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 AGAP2Q99490 1192 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 SLC38A3Q99624 504 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 DPYSL5Q9BPU6 564 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 FUCA2Q9BTY2 467 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 PCDH9Q9HC56 1237 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 TMEM9Q9P0T7 183 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 ZNHIT2Q9UHR6 403 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 LUC7L2Q9Y383 392 aaKnown RBP12.68□□□□□ -0.38
CD44-203ENST00000278386 PRKAB1Q9Y478 270 aa12.68□□□□□ -0.38
CD44-203ENST00000278386 SLC4A1P02730 911 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
CD44-203ENST00000278386 ITGB2P05107 769 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 MX2P20592 715 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 CES1P23141 567 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 CCNCP24863 283 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 PBX1P40424 430 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 ARSEP51690 589 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 CYP4F2P78329 520 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 GPLD1P80108 840 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 PDK2Q15119 407 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 LINC00303Q3SY05 128 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 SNAP47Q5SQN1 464 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 CHST15Q7LFX5 561 aaPredicted RBP12.67□□□□□ -0.38
CD44-203ENST00000278386 DTX1Q86Y01 620 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 MAP7D3Q8IWC1 876 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 NRSN1Q8IZ57 195 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 IL22RA1Q8N6P7 574 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 EXD3Q8N9H8 876 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 OR10G6Q8NH81 332 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 FAM71BQ8TC56 605 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 SCARF2Q96GP6 870 aaPredicted RBP12.67□□□□□ -0.38
CD44-203ENST00000278386 COX14Q96I36 57 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 B3GNT4Q9C0J1 378 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 PKD2L2Q9NZM6 624 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 AMACRQ9UHK6 382 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 CAPN11Q9UMQ6 739 aa12.67□□□□□ -0.38
CD44-203ENST00000278386 EFCAB7A8K855 629 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 SNX2O60749 519 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 PROSCO94903 275 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 GYPCP04921 128 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 KRT7P08729 469 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 FAM87AP0C7U9 286 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 FGF3P11487 239 aaPredicted RBP12.66□□□□□ -0.38
CD44-203ENST00000278386 ACP5P13686 325 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 WT1P19544 449 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms