RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PRRX2Q99811 253 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 FERMT1Q9BQL6 677 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 HERC2P3Q9BVR0 1158 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 MRIQ9BWK5 157 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 PUS3Q9BZE2 481 aaKnown RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 WDR11Q9BZH6 1224 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD44-202ENST00000278385 COQ10BQ9H8M1 238 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 GDAP2Q9NXN4 497 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 SPASTQ9UBP0 616 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 ARMCX3Q9UH62 379 aaPredicted RBP4.64□□□□□ -1.67
CD44-202ENST00000278385 AMACRQ9UHK6 382 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 PSME2Q9UL46 239 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 NAALAD2Q9Y3Q0 740 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 NEU2Q9Y3R4 380 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 DUOX1Q9NRD9 1551 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 KIF16BQ96L93 1317 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 SALL3Q9BXA9 1300 aa4.64□□□□□ -1.67
CD44-202ENST00000278385 PNMA6EA0A0J9YXQ4 647 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 LOC102723971A0A1B0GUV8 181 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 GOLGA6L7A0A1B0GV03 622 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 PRSS29PA6NIE9 313 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 FAM90A7PA6NKC0 464 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 SH2D7A6NKC9 451 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 FAM90A22PA8MWA6 464 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 FAM90A12PA8MX19 464 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 FAM90A23PA8MXZ1 464 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 KCNJ18B7U540 433 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 C1QTNF3-AMACRE9PGA6 284 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 SLC33A1O00400 549 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 POLR2DO15514 142 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 HOXA3O43365 443 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 ZC3H11AO75152 810 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD44-202ENST00000278385 FRAT2O75474 233 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 RPP40O75818 363 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 CIAO1O76071 339 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 PRAMEF12O95522 483 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 PDGFBP01127 241 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 CFIP05156 583 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 ZFYP08048 801 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 GNAI3P08754 354 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 WEE2P0C1S8 567 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 NCF1P14598 390 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 ETS1P14921 441 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 TPH1P17752 444 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 GABRB1P18505 474 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 ACRV1P26436 265 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 MGAT1P26572 445 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 TTKP33981 857 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 CRHR1P34998 444 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 PRKCIP41743 596 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 LBX1P52954 281 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 NME5P56597 212 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 UFM1P61960 85 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 OLR1P78380 273 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 PMP22Q01453 160 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 DPYSQ14117 519 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 BOP1Q14137 746 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 ARHGEF7Q14155 803 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 GAMTQ14353 236 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 KCNJ12Q14500 433 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 NPY5RQ15761 445 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 DPYSL2Q16555 572 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 CCDC142Q17RM4 750 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 LEXMQ3ZCV2 418 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 SLC9B1Q4ZJI4 515 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 LRRC24Q50LG9 513 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 TDRD12Q587J7 1177 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 TCTE1Q5JU00 501 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 RIPPLY2Q5TAB7 128 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 METTL11BQ5VVY1 283 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 DPY19L2P1Q6NXN4 242 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 CDC73Q6P1J9 531 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 SLC36A4Q6YBV0 504 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 ARMC9Q7Z3E5 817 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 ADCK2Q7Z695 626 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 TICAM1Q8IUC6 712 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 P3H2Q8IVL5 708 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 ELMOD2Q8IZ81 293 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 ZNF808Q8N4W9 903 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 MINDY1Q8N5J2 469 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 MB21D1Q8N884 522 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 FSIP1Q8NA03 581 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 IQUBQ8NA54 791 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 KDM1BQ8NB78 822 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 BBOF1Q8ND07 529 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 RBM15BQ8NDT2 890 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 BCAS4Q8TDM0 211 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 METTL21AQ8WXB1 218 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 LPIN2Q92539 896 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 THRSPQ92748 146 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 GRAMD1AQ96CP6 724 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 PRR11Q96HE9 360 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 ZBED3Q96IU2 234 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 WDFY2Q96P53 400 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 CACNG6Q9BXT2 260 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 MOV10L1Q9BXT6 1211 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 GPR87Q9BY21 358 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 CPEB1Q9BZB8 566 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms