RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NEK10Q6ZWH5 1172 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 THAP5Q7Z6K1 395 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 CLEC14AQ86T13 490 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 ZC3HC1Q86WB0 502 aaKnown RBP12.8□□□□□ -0.36
HERC6-202ENST00000273960 SLC38A6Q8IZM9 456 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 OR6B3Q8NGW1 331 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 PPM1MQ96MI6 270 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 DEPDC7Q96QD5 511 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 UTS2RQ9UKP6 389 aa12.8□□□□□ -0.36
HERC6-202ENST00000273960 LACTBL1A8MY62 500 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CRCPO75575 148 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MT-CYBP00156 380 aaPredicted RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 CD4P01730 458 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ALOX5P09917 674 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 RFC2P35250 354 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 DPY19L1Q2PZI1 675 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ZNF789Q5FWF6 425 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 WDR45BQ5MNZ6 344 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ILDR2Q71H61 639 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CTU1Q7Z7A3 348 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 MFSD6LQ8IWD5 586 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 UBE2J2Q8N2K1 259 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 OR52K2Q8NGK3 314 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MCFD2Q8NI22 146 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 SH3GL1Q99961 368 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MYOCQ99972 504 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ZNF670Q9BS34 389 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 ARMC1Q9NVT9 282 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 BPTFQ12830 3046 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ADGRA2Q96PE1 1338 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 LOC100506127A0A0U1RQW1 187 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 H0YCG3 227 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MAFGO15525 162 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ARIH2O95376 493 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 FTH1P02794 183 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 VTNP04004 478 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 FYNP06241 537 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 GSNP06396 782 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 THRBP10828 461 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CXCR2P25025 360 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CD40LGP29965 261 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 FRG1Q14331 258 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 PCSK7Q16549 785 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CEP78Q5JTW2 689 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 NOL9Q5SY16 702 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 MIER2Q8N344 545 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CADM2Q8N3J6 435 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 NODALQ96S42 347 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 TBCDQ9BTW9 1192 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 IL22Q9GZX6 179 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 ERVK-18Q9QC07 812 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.79□□□□□ -0.36
HERC6-202ENST00000273960 PMPCBO75439 489 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 HTR1AP08908 422 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 HGFP14210 728 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CRHBPP24387 322 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MAGEA6P43360 314 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 LEPRP48357 1165 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 CLK1P49759 484 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 FOXA1P55317 472 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MTPNP58546 118 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 DGUOKQ16854 277 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 CTU2Q2VPK5 515 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 GTF2IRD2BQ6EKJ0 949 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 EFCAB12Q6NXP0 572 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 TAF2Q6P1X5 1199 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 GTF2IRD2Q86UP8 949 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 OR7G1Q8NGA0 311 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 FRS2Q8WU20 508 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 RORBQ92753 470 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 MYRFLQ96LU7 910 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 TMEM246Q9BRR3 403 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 TNKS2Q9H2K2 1166 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 AMBNQ9NP70 447 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 AKIP1Q9NQ31 210 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 INTS7Q9NVH2 962 aaKnown RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.79□□□□□ -0.36
HERC6-202ENST00000273960 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
HERC6-202ENST00000273960 NCF1BA6NI72 391 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 PDZK1P1A8MUH7 402 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 NCF1CA8MVU1 366 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 HOXC11O43248 304 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 H2AFYO75367 372 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 NCF1P14598 390 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 SLC6A2P23975 617 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 SULT1E1P49888 294 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 GP2P55259 537 aaKnown RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 CD47Q08722 323 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 PPIL2Q13356 520 aa12.78□□□□□ -0.36
HERC6-202ENST00000273960 TRIP4Q15650 581 aaPredicted RBP12.78□□□□□ -0.36
HERC6-202ENST00000273960 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms