RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GPR39O43194 453 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 FOXD2O60548 495 aaPredicted RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A9O60656 530 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 CER1O95813 267 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 HOXC4P09017 264 aaPredicted RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A6P19224 532 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A1P22309 533 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A4P22310 534 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 TEAD1P28347 426 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A3P35503 534 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A5P35504 534 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 POLD2P49005 469 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 KIAA1024LP59773 190 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 CDK16Q00536 496 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 BNIP3Q12983 259 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 STPG1Q5TH74 334 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 IZUMO3Q5VZ72 239 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 LRRC8BQ6P9F7 803 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 ENPP7Q6UWV6 458 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 FAM151BQ6UXP7 276 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 MACC1Q6ZN28 852 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 CAND1Q86VP6 1230 aaKnown RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 TRAM1L1Q8N609 369 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 PTCD2Q8WV60 388 aaKnown RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 TSACCQ96A04 125 aaPredicted RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 TCEAL2Q9H3H9 227 aaPredicted RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 ERVMER34-1Q9H9K5 563 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A7Q9HAW7 530 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A10Q9HAW8 530 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 UGT1A8Q9HAW9 530 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 ARFGAP3Q9NP61 516 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 PHPT1Q9NRX4 125 aaPredicted RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 RAD18Q9NS91 495 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 DNAJC28Q9NX36 388 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 NFKBIL1Q9UBC1 381 aaPredicted RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 TMEM98Q9Y2Y6 226 aa12.68□□□□□ -0.38
SS18-202ENST00000269138 OAS3Q9Y6K5 1087 aaKnown RBP12.68□□□□□ -0.38
SS18-202ENST00000269138 MROH6A6NGR9 719 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 CACNB4O00305 520 aaPredicted RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 SDC3O75056 442 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 FUCA1P04066 466 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 MYCLP1P12525 358 aaPredicted RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 MGAT1P26572 445 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 SPAM1P38567 509 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 XIAPP98170 497 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 PTK2BQ14289 1009 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ALG11Q2TAA5 492 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ATP13A5Q4VNC0 1218 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ZNF648Q5T619 568 aaPredicted RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 DOK6Q6PKX4 331 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 RD3Q7Z3Z2 195 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 PARGQ86W56 976 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 PPIL6Q8IXY8 311 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 RBFAQ8N0V3 343 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 MCUQ8NE86 351 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 COX14Q96I36 57 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 HIC2Q96JB3 615 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ZNF778Q96MU6 729 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 WDR92Q96MX6 357 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 PLEKHG4BQ96PX9 1271 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 FRMD8Q9BZ67 464 aaPredicted RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 CDH19Q9H159 772 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 SUDS3Q9H7L9 328 aaPredicted RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 MRPL40Q9NQ50 206 aaKnown RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 DNAAF2Q9NVR5 837 aaKnown RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 SLC2A6Q9UGQ3 507 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 GLYATL1P3A0A0U1RQE8 302 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 FAM187AA6NFU0 413 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 CSF2P04141 144 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 CEACAM5P06731 702 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ADRA1DP25100 572 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 HTR1BP28222 390 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 RPL21P46778 160 aaKnown RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 RXRGP48443 463 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 NPY2RP49146 381 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ARSDP51689 593 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 SRP54P61011 504 aaKnown RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 PEX6Q13608 980 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 TUBB2AQ13885 445 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 TCEA2Q15560 299 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 HID1Q8IV36 788 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 MPP5Q8N3R9 675 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 OR56A4Q8NGH8 313 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 PDXPQ96GD0 296 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 SERPINB12Q96P63 405 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 RANBP9Q96S59 729 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 ZSCAN5AQ9BUG6 496 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 TUBB2BQ9BVA1 445 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 FAM96AQ9H5X1 160 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 CHRAC1Q9NRG0 131 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms