RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 C10orf82Q8WW14 230 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SERAC1Q96JX3 654 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 LURAP1Q96LR2 239 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 OCEL1Q9H607 264 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 POPDC2Q9HBU9 364 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CD93Q9NPY3 652 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 AAASQ9NRG9 546 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TOR1BO14657 336 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ARP10275 920 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 BMP6P22004 513 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 KELP23276 732 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PTPN9P43378 593 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SFT2D3Q587I9 215 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PGM2L1Q6PCE3 622 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 AMIGO1Q86WK6 493 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 STAG3L4Q8TBR4 150 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CCDC120Q96HB5 630 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 EBNA1BP2Q99848 306 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 RACGAP1Q9H0H5 632 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 RAD18Q9NS91 495 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PCDHB7Q9Y5E2 793 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SGCEO43556 437 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PTTG1O95997 202 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 S100A3P33764 101 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 MAPKAPK2P49137 400 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CLCN5P51795 746 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CDK18Q07002 472 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 GRSF1Q12849 480 aaKnown RBP eCLIP5.69□□□□□ -1.5
VCAN-201ENST00000265077 COLEC12Q5KU26 742 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ZNF438Q7Z4V0 828 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PSTKQ8IV42 348 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 SERPINB11Q96P15 392 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 GSDMCQ9BYG8 508 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TMX2Q9Y320 296 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PLLPQ9Y342 182 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 BPGMP07738 259 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ITGA2P17301 1181 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 IL2P60568 153 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ATP6V0D1P61421 351 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SLC6A3Q01959 620 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 FGL2Q14314 439 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ZNF181Q2M3W8 571 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 LYPLAL1Q5VWZ2 237 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SPPL2AQ8TCT8 520 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 IDI2Q9BXS1 227 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 RBM22Q9NW64 420 aaKnown RBP eCLIP5.69□□□□□ -1.5
VCAN-201ENST00000265077 CLN6Q9NWW5 311 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 AKAP7Q9P0M2 348 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 RPS6KB2Q9UBS0 482 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ACSL5Q9ULC5 683 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 GMPPBQ9Y5P6 360 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ACKR2O00590 384 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 KPNA6O60684 536 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 OR5F1O95221 314 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SERPINA1P01009 418 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 AXLP30530 894 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 GABRB2P47870 512 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PPIL2Q13356 520 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 FSCN1Q16658 493 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 CDKL4Q5MAI5 379 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TRPV1Q8NER1 839 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TMEM134Q9H6X4 195 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PRDM5Q9NQX1 630 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 TLR8Q9NR97 1041 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 SLC7A8Q9UHI5 535 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SLIT3O75094 1523 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 KIF13AQ9H1H9 1805 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 H3BN98 237 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 THRBP10828 461 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ZNF132P52740 706 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 NDST1P52848 882 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PWP1Q13610 501 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 DDX39BQ13838 428 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 ALG1LQ6GMV1 187 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TCEAL6Q6IPX3 200 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ANKRD26P1Q6NSI1 321 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 MILR1Q7Z6M3 343 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 COMMD7Q86VX2 200 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 OOSP2Q86WS3 158 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TTC29Q8NA56 475 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 FBXO30Q8TB52 745 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 COLEC11Q9BWP8 271 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 KAT8Q9H7Z6 458 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 UBE2Q2LH0YL09 131 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CRTAPO75718 401 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 HMBSP08397 361 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CBX5P45973 191 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TTPAP49638 278 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CAMK1Q14012 370 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ZIK1Q3SY52 487 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 LCN1P1Q5VSP4 162 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ZNF574Q6ZN55 896 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 CDK20Q8IZL9 346 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SRFBP1Q8NEF9 429 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 CERS2Q96G23 380 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 GFM1Q96RP9 751 aaKnown RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 PIGUQ9H490 435 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 UBR2Q8IWV8 1755 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 RCCD1A6NED2 376 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 UQCRC1P31930 480 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms