RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 RELAQ04206 551 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 AFTPHQ6ULP2 937 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 BORCS6Q96GS4 357 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 LGMNQ99538 433 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SPON2Q9BUD6 331 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 POLR1EQ9GZS1 481 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 CCM2LQ9NUG4 571 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 KLHL28Q9NXS3 571 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 IFNA16P05015 189 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 PAICSP22234 425 aaKnown RBP11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 NFIAQ12857 509 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 TREML1Q86YW5 311 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 SLC7A5P2Q9GIP4 190 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 ELOVL4Q9GZR5 314 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 PRDM12Q9H4Q4 367 aa11.65□□□□□ -0.55
DNMT3A-201ENST00000264709 REM1O75628 298 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MOCS2O96007 188 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 BACE1P56817 501 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 DCDC5Q6ZRR9 648 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ANKRD23Q86SG2 305 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 HID1Q8IV36 788 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 CITED4Q96RK1 184 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MED28Q9H204 178 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 F5P12259 2224 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 BTN3A1O00481 513 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ARPC2O15144 300 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 HMGCS2P54868 508 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 TMEM44Q2T9K0 475 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 C6orf183Q5T699 404 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MFSD14CQ5VZR4 134 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 TRIM40Q6P9F5 258 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 R3HCC1LQ7Z5L2 792 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 TEFMQ96QE5 360 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 PFDN2Q9UHV9 154 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 H3BN98 237 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SSNA1O43805 119 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 DGKAP23743 735 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ACOX1Q15067 660 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SIX5Q8N196 739 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 KCNU1A8MYU2 1149 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 FGFR1P11362 822 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 CHI3L1P36222 383 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 PLK1P53350 603 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 EEPD1Q7L9B9 569 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 DCSTAMPQ9H295 470 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 TNRC6CQ9HCJ0 1690 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 GUCA1CO95843 209 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 CDH5P33151 784 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 CTSKP43235 329 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 CDH18Q13634 790 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SLC9A4Q6AI14 798 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 FAR1Q8WVX9 515 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MARK4Q96L34 752 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 A0A1W2PP18 115 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 A0A1W2PQ72 361 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 RAMP2O60895 175 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ASMTP46597 345 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SLC30A8Q8IWU4 369 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ST3GAL5Q9UNP4 418 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 C11orf88Q6PI97 169 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 XYLT1Q86Y38 959 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 FBXO30Q8TB52 745 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SPPL2AQ8TCT8 520 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 FAM126AQ9BYI3 521 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ZNF70Q9UC06 446 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MTRF1O75570 445 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 ERVK-8P63133 956 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SCRN3Q0VDG4 424 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 PCLAFQ15004 111 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 LPCAT1Q8NF37 534 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MMP19Q99542 508 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 SLC30A2Q9BRI3 323 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 MRM3Q9HC36 420 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 NT5MQ9NPB1 228 aa11.64□□□□□ -0.55
DNMT3A-201ENST00000264709 GLYATQ6IB77 296 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 BHLHB9Q6PI77 547 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 GCNT7Q6ZNI0 430 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 ZNF767PQ75MW2 155 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 OR5K1Q8NHB7 308 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 ATPIF1Q9UII2 106 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 KCNH4Q9UQ05 1017 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 ANGPT4Q9Y264 503 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 KNTC1P50748 2209 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 CTC1Q2NKJ3 1217 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 PAK6Q9NQU5 681 aaPredicted RBP11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 DCKP27707 260 aa11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 GALNT1Q10472 559 aaPredicted RBP11.63□□□□□ -0.55
DNMT3A-201ENST00000264709 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 589.7 ms