RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 NDUFA9Q16795 377 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 CLEC4DQ8WXI8 215 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 MCRS1Q96EZ8 462 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 ABCG8Q9H221 673 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 ECDO95905 644 aaPredicted RBP16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 LGALS3BPQ08380 585 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 ATP13A5Q4VNC0 1218 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 RFTN2Q52LD8 501 aaPredicted RBP16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 TMPRSS11BQ86T26 416 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 HEATR4Q86WZ0 1026 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 PLD4Q96BZ4 506 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 MCMBPQ9BTE3 642 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 SLC25A51Q9H1U9 297 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 RNPEPL1Q9HAU8 725 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 COL20A1Q9P218 1284 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 ZFP37Q9Y6Q3 630 aaPredicted RBP16.81■□□□□ 0.28
CROCCP3-201ENST00000263511 TSC22D2O75157 780 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 HOXB6P17509 224 aaKnown RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 EML3Q32P44 896 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 C9orf64Q5T6V5 341 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 TCF25Q9BQ70 676 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 ERGIC3Q9Y282 383 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 KPNA4O00629 521 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 TRBC1P01850 177 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 ELF3P78545 371 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 PPIDQ08752 370 aaKnown RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 NR1D2Q14995 579 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 LINGO4Q6UY18 593 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 DEF8Q6ZN54 512 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 SPATA19Q7Z5L4 167 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 YTHDF3Q7Z739 585 aaKnown RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 TEX47Q8TBZ9 253 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 NMUR1Q9HB89 426 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 DIABLOQ9NR28 239 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 ZMYND8Q9ULU4 1186 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 LOC100506127A0A0U1RQW1 187 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 LRRC72A6NJI9 287 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 KCNU1A8MYU2 1149 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 MCIDASD6RGH6 385 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 CA12O43570 354 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 BPGMP07738 259 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 GNPDA1P46926 289 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 TAB1Q15750 504 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 DHDDSQ86SQ9 333 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 PEG10Q86TG7 708 aaKnown RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 PROSER1Q86XN7 944 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 TRIM8Q9BZR9 551 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 BBIP1A8MTZ0 92 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 DHX15O43143 795 aaKnown RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 SNAP91O60641 907 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 STK16O75716 305 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 AP2A1O95782 977 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 CDH5P33151 784 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 PBX3P40426 434 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 ZNF280AP59817 542 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 ILF3Q12906 894 aaKnown RBP eCLIP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 ZIK1Q3SY52 487 aaPredicted RBP16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 TIGD2Q4W5G0 525 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 RASGEF1CQ8N431 466 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 LRMDAQ9H2I8 198 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 CPQQ9Y646 472 aa16.8■□□□□ 0.28
CROCCP3-201ENST00000263511 MFN2O95140 757 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 STAT5AP42229 794 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 HNMTP50135 292 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 DSC2Q02487 901 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 GALNT18Q6P9A2 607 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 ADAMTS15Q8TE58 950 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 SLC44A1Q8WWI5 657 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 LRRC4CQ9HCJ2 640 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 ZNF490Q9ULM2 529 aaPredicted RBP16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 STON1Q9Y6Q2 735 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 A0A1W2PPM1 405 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 IPO13O94829 963 aaKnown RBP16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 LRIG2O94898 1065 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 ITPKBP27987 946 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 CYP4F2P78329 520 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 CAP1Q01518 475 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 RFX4Q33E94 735 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 TAC4Q86UU9 113 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 PRPF19Q9UMS4 504 aaKnown RBP16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 MRC1P22897 1456 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 PEX10O60683 326 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 ADSSP30520 456 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 RCVRNP35243 200 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 NDST2P52849 883 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 CCNYL2Q5T2Q4 361 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 BROXQ5VW32 411 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 TTC27Q6P3X3 843 aa16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 NKD2Q969F2 451 aaPredicted RBP16.79■□□□□ 0.28
CROCCP3-201ENST00000263511 MPP4Q96JB8 637 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms