RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DPYDQ12882 1025 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NFATC3Q12968 1075 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 KCNJ11Q14654 390 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CA9Q16790 459 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NOMO2Q5JPE7 1267 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 AGAP6Q5VW22 663 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF544Q6NX49 715 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NUDT18Q6ZVK8 323 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 KRT25Q7Z3Z0 450 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CAMKMTQ7Z624 323 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SNX29P2Q8IUI4 249 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF34Q8IZ26 560 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CLRN3Q8NCR9 226 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CPEB3Q8NE35 698 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 OR2T3Q8NH03 318 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ADAMTS14Q8WXS8 1223 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DCUN1D1Q96GG9 259 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NSL1Q96IY1 281 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 AGAP4Q96P64 663 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 KCNA7Q96RP8 456 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 STRBPQ96SI9 672 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NAT9Q9BTE0 207 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GSDMCQ9BYG8 508 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TDRD3Q9H7E2 651 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NHEJ1Q9H9Q4 299 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 POLE4Q9NR33 117 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PLCXD1Q9NUJ7 323 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 EVA1BQ9NVM1 165 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GDE1Q9NZC3 331 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 H2AFY2Q9P0M6 372 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SLC27A5Q9Y2P5 690 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DNMT3AQ9Y6K1 912 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 J3QW42 95 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TFECO14948 347 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 UGDHO60701 494 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 VPS4BO75351 444 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PDE8BO95263 885 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TOP3BO95985 862 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PEX11BO96011 259 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PGK1P00558 417 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TNNC2P02585 160 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 OPN1LWP04000 364 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CYP11A1P05108 521 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 UMPSP11172 480 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CKMT1AP12532 417 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SLC1A3P43003 542 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PDE1AP54750 535 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SLC14A1Q13336 389 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PDK1Q15118 436 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 FAM189A2Q15884 450 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TYSND1Q2T9J0 566 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 LIN9Q5TKA1 542 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GPR139Q6DWJ6 353 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 RNF111Q6ZNA4 994 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 KIAA0408Q6ZU52 694 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 C16orf62Q7Z3J2 963 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TBC1D10CQ8IV04 446 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 UNC5CLQ8IV45 518 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DENND6AQ8IWF6 608 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PCDH20Q8N6Y1 951 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 COPS5Q92905 334 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CLUHP3Q96NS8 147 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CCNL2Q96S94 520 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 STRA6Q9BX79 667 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TOR3AQ9H497 397 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SETD4Q9NVD3 440 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ZSWIM5Q9P217 1185 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DENND2AQ9ULE3 1009 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CROCCQ5TZA2 2017 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 GRID2IPA4D2P6 1211 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 FOXE1O00358 373 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 KCNK2O95069 426 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 H6PDO95479 791 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 CKMT2P17540 419 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 IL13P35225 146 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 TOB1P50616 345 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PUM1Q14671 1186 aaKnown RBP eCLIP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MLC1Q15049 377 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF827Q17R98 1081 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 AASDHQ4L235 1098 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 KLHL12Q53G59 568 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ACER2Q5QJU3 275 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 CCDC137Q6PK04 289 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PYROXD2Q8N2H3 581 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 NKAPQ8N5F7 415 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 CCDC185Q8N715 623 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF511Q8NB15 262 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF512Q96ME7 567 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 AGAP2Q99490 1192 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 IL12RB2Q99665 862 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PELOQ9BRX2 385 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 UCK2Q9BZX2 261 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 TWSG1Q9GZX9 223 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 NANOGQ9H9S0 305 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZFP14Q9HCL3 533 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ASCL3Q9NQ33 180 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PRMT8Q9NR22 394 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 FAM207AQ9NSI2 230 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms