RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LRRC40Q9H9A6 602 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CYP3A43Q9HB55 503 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 MTMR10Q9NXD2 777 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 HCN3Q9P1Z3 774 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PEAK1Q9H792 1746 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 POM121CA8CG34 1229 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CHURC1-FNTBB4DL54 471 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PIK3R2O00459 728 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF197O14709 1029 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC2A5P22732 501 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PROZP22891 400 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PRDX5P30044 214 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CASP3P42574 277 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF81P51508 661 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 KCNK10P57789 538 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 BMPR2Q13873 1038 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ANKRD22Q5VYY1 191 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PPP1R18Q6NYC8 613 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF720Q7Z2F6 126 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ADGRF2Q8IZF7 708 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 KDF1Q8NAX2 398 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ELMO3Q96BJ8 720 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PTERQ96BW5 349 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM136AQ96C01 138 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TRNT1Q96Q11 434 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 C19orf12Q9NSK7 152 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FBXO10Q9UK96 956 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 A0A1W2PQJ5 194 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 A8MUA0 341 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC9A3R1O14745 358 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 AKAP8O43823 692 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CLEC3BP05452 202 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 UMPSP11172 480 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FGFR3P22607 806 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CRATP43155 626 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 EIF5AP63241 154 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TFAMQ00059 246 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 MADCAM1Q13477 382 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RAP1GAP2Q684P5 730 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RETSATQ6NUM9 610 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 KCT2Q8NC54 265 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RBM15BQ8NDT2 890 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 C1orf74Q96LT6 269 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 KCNS3Q9BQ31 491 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 NEURL2Q9BR09 285 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TUT1Q9H6E5 874 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SARDHQ9UL12 918 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CDYLQ9Y232 598 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PADI2Q9Y2J8 665 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ASB14A6NK59 587 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PLOD2O00469 737 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 HOXC11O43248 304 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 MTX2O75431 263 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ANGPTL1O95841 491 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 HNRNPLP14866 589 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC5A2P31639 672 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ARL3P36405 182 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CAP1Q01518 475 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 C19orf57Q0VDD7 668 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF211Q13398 564 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GRIK5Q16478 980 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GALNTL6Q49A17 601 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 AKR1C8PQ5T2L2 129 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 C1orf189Q5VU69 101 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC9B2Q86UD5 537 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PGBD3Q8N328 593 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TTC9Q92623 222 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 NARFLQ9H6Q4 476 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 AASSQ9UDR5 926 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ATXN7L1Q9ULK2 861 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PTCH2Q9Y6C5 1203 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 A0A1W2PQ67 120 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ACOD1A6NK06 481 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GDF11O95390 407 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 IGFBP1P08833 259 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF35P13682 527 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ATP5F1P24539 256 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PRDX6P30041 224 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PPP5CP53041 499 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SCARF1Q14162 830 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PLEKHG4Q58EX7 1191 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RBM48Q5RL73 367 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TMEM179Q6ZVK1 233 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TMC8Q8IU68 726 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RSC1A1Q92681 617 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 NSUN4Q96CB9 384 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GFM1Q96RP9 751 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ICKQ9UPZ9 632 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FIS1Q9Y3D6 152 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CYP2D7A0A087X1C5 515 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 DCDC2CA8MYV0 355 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 DNAJA2O60884 412 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 MED24O75448 989 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 IFNA17P01571 189 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 XRCC1P18887 633 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 MATKP42679 507 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RPL6Q02878 288 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GRM4Q14833 912 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms