RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 M0R2N6 131 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 SLC31A1O15431 190 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 GPR89BP0CG08 455 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 FGFR3P22607 806 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ABRQ12979 859 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 TBX2Q13207 712 aaPredicted RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ITGADQ13349 1161 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 SNTA1Q13424 505 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 GRAMD1BQ3KR37 738 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 LYSMD4Q5XG99 296 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 RFWD3Q6PCD5 774 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 GPRIN3Q6ZVF9 776 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ST13P4Q8IZP2 240 aaPredicted RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 NOA1Q8NC60 698 aaKnown RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 DNAJB8Q8NHS0 232 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 PACSIN1Q9BY11 444 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 EPHA6Q9UF33 1036 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ACTR1BP42025 376 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 AP1S2P56377 157 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ACTR1AP61163 376 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ZNF805Q5CZA5 627 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 MED27Q6P2C8 311 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 C16orf62Q7Z3J2 963 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 SIDT2Q8NBJ9 832 aaKnown RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 USP6NLQ92738 828 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 NAT6Q93015 286 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 CAVIN3Q969G5 261 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 KRT84Q9NSB2 600 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 KLHL20Q9Y2M5 609 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ESYT3A0FGR9 886 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 FYNP06241 537 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 SSR2P43308 183 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 GNPDA1P46926 289 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 DRICH1Q6PGQ1 229 aaPredicted RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 CPXM2Q8N436 756 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 POMGNT2Q8NAT1 580 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 AGR3Q8TD06 166 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 LMX1AQ8TE12 382 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 DACT3Q96B18 629 aaPredicted RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 UGT2B28Q9BY64 529 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 TCAF1Q9Y4C2 921 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 PRAMEF1O95521 474 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 ALDH18A1P54886 795 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 DET1Q7L5Y6 550 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 DDX1Q92499 740 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CNDP1Q96KN2 507 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SLC25A23Q9BV35 468 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 FTSJ1Q9UET6 329 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RPS6KA6Q9UK32 745 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 POLR1DQ9Y2S0 133 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MYO1CO00159 1063 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 BIRC5O15392 142 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SLURP2P0DP57 97 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MDH1P40925 334 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 GALNT3Q14435 633 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 C2CD6Q53TS8 623 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 NLRP14Q86W24 1093 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 FNDC5Q8NAU1 212 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 LNX1Q8TBB1 728 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 HM13Q8TCT9 377 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 TM9SF4Q92544 642 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 C1QTNF1Q9BXJ1 281 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RIBC2Q9H4K1 309 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MVB12BQ9H7P6 319 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CHST7Q9NS84 486 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SPIN1Q9Y657 262 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RGPD2P0DJD1 1756 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 TMEM120BA0PK00 339 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CPED1A4D0V7 1026 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RNGTTO60942 597 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 NOL4O94818 638 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 LDOC1O95751 146 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MASP1P48740 699 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RAB43Q86YS6 212 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 C4orf33Q8N1A6 199 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 ICA1LQ8NDH6 482 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RASSF5Q8WWW0 418 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 KREMEN1Q96MU8 473 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SHCBP1LQ9BZQ2 653 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MRPS30Q9NP92 439 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SNX8Q9Y5X2 465 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 WFS1O76024 890 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CST3P01034 146 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 EPOP01588 193 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SERPINB10P48595 397 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MLLT6P55198 1093 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 FOXM1Q08050 763 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SNAP47Q5SQN1 464 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CCDC33Q8N5R6 958 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SMG8Q8ND04 991 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 DPEP3Q9H4B8 488 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 PLK2Q9NYY3 685 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 PRKAG3Q9UGI9 489 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 CA14Q9ULX7 337 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms