RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LYPLA1O75608 230 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-201ENST00000254816 LEFTY1O75610 366 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ATP5BP06576 529 aaKnown RBP18.83■□□□□ 0.6
TRIM47-201ENST00000254816 CA5AP35218 305 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 STX3Q13277 289 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ITGA9Q13797 1035 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 POM121L1PQ3SYA9 428 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ARSIQ5FYB1 569 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 LPGAT1Q92604 370 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 S1PR5Q9H228 398 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ACSS2Q9NR19 701 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 IGSF5Q9NSI5 407 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 INTS10Q9NVR2 710 aaKnown RBP18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ELOVL2Q9NXB9 296 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 OBP2AQ9NY56 170 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 DEC1Q9P2X7 70 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 WASF2Q9Y6W5 498 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-201ENST00000254816 CTSLP07711 333 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 CCDC166P0CW27 439 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 CES5AQ6NT32 575 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 PARM1Q6UWI2 310 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 CLNKQ7Z7G1 428 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 WFIKKN2Q8TEU8 576 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 FGF14Q92915 247 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 MOCOSQ96EN8 888 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 TSPAN17Q96FV3 270 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 HEPHQ9BQS7 1158 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 AARSD1Q9BTE6 412 aaKnown RBP18.82■□□□□ 0.6
TRIM47-201ENST00000254816 RPP25Q9BUL9 199 aaKnown RBP18.82■□□□□ 0.6
TRIM47-201ENST00000254816 TMEM120AQ9BXJ8 343 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 CLDND1Q9NY35 253 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 XPR1Q9UBH6 696 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 HEY2Q9UBP5 337 aa18.82■□□□□ 0.6
TRIM47-201ENST00000254816 MUC22E2RYF6 1773 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-201ENST00000254816 DENND4AQ7Z401 1863 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 WASH3PC4AMC7 463 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 GAPDHSO14556 408 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 COL6A2P12110 1019 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 FDXRP22570 491 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 LHCGRP22888 699 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 PDGFRLQ15198 375 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 PREPLQ4J6C6 727 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 LRRC66Q68CR7 880 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 GRAMD4Q6IC98 578 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 ATG14Q6ZNE5 492 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 NAT14Q8WUY8 206 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SLC7A6OSQ96CW6 309 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SCRN2Q96FV2 425 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 PRR11Q96HE9 360 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 ZNF641Q96N77 438 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 KCNK13Q9HB14 408 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SLC30A1Q9Y6M5 507 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 PLXNB3Q9ULL4 1909 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SRP72O76094 671 aaKnown RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SRPRAP08240 638 aaKnown RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 RALBP11234 206 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 HLA-EP13747 358 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 BPIP17213 487 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 OCRLQ01968 901 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 FCHO2Q0JRZ9 810 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 ZNF398Q8TD17 642 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SGF29Q96ES7 293 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 CCDC97Q96F63 343 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 BRD9Q9H8M2 597 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 ZDHHC4Q9NPG8 344 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-201ENST00000254816 FAM50BQ9Y247 325 aa18.81■□□□□ 0.6
TRIM47-201ENST00000254816 SNNO75324 88 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-201ENST00000254816 ATP5HO75947 161 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 PRAMEF1O95521 474 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 ASLP04424 464 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 KITP10721 976 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 MYL2P10916 166 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-201ENST00000254816 HOXB8P17481 243 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-201ENST00000254816 ARFIP2P53365 341 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 ST8SIA6P61647 398 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 RUNX3Q13761 415 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 NAPRTQ6XQN6 538 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 RFLNAQ6ZTI6 216 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 TPRG1Q6ZUI0 275 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 USP45Q70EL2 814 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 YAF2Q8IY57 180 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 RAB3IL1Q8TBN0 382 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 MARCOQ9UEW3 520 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-201ENST00000254816 PLA2G4CQ9UP65 541 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 SLC8A2Q9UPR5 921 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 PPIL1Q9Y3C6 166 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 WISP3O95389 354 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-201ENST00000254816 SERPINB3P29508 390 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 ARRB2P32121 409 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 SLC1A6P48664 564 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 CTC1Q2NKJ3 1217 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 WLSQ5T9L3 541 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 CHRDL2Q6WN34 429 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 PLPP6Q8IY26 295 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 ERLEC1Q96DZ1 483 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 BIRC8Q96P09 236 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 RAB3IPQ96QF0 476 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms