RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IMP3Q9NV31 184 aaKnown RBP18.91■□□□□ 0.62
PTPRE-201ENST00000254667 STK16O75716 305 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 SP100P23497 879 aaPredicted RBP18.91■□□□□ 0.62
PTPRE-201ENST00000254667 AARSD1Q9BTE6 412 aaKnown RBP18.91■□□□□ 0.62
PTPRE-201ENST00000254667 CLIC5Q9NZA1 410 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 SLC6A2P23975 617 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 C16orf72Q14CZ0 275 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 FNBP1LQ5T0N5 605 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 CPTPQ5TA50 214 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 CHURC1-FNTBB4DL54 471 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 OR6B1O95007 311 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 FGFR3P22607 806 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ADSSP30520 456 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 PSMD7P51665 324 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 PRKCZQ05513 592 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ACAP2Q15057 778 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 BROXQ5VW32 411 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 METTL21CQ5VZV1 264 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 TPGS2Q68CL5 300 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 FOXR1Q6PIV2 292 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 TEFMQ96QE5 360 aaKnown RBP18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ZDHHC4Q9NPG8 344 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ASB3Q9Y575 518 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ZBTB22O15209 634 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 NRP2O60462 931 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 SSR2P43308 183 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 LAPTM5Q13571 262 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 ALYREFQ86V81 257 aaKnown RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 CACTIN-AS1Q8N1I8 211 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 RPRD1BQ9NQG5 326 aaKnown RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 DNAJC28Q9NX36 388 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 SUV39H1O43463 412 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 PEX10O60683 326 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 CST1P01037 141 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 MTAPQ13126 283 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 TAF13Q15543 124 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 TSTD2Q5T7W7 516 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 ZYG11AQ6WRX3 759 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 OTOP2Q7RTS6 562 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 NIPA2Q8N8Q9 360 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 OR4A15Q8NGL6 344 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 OR10G6Q8NH81 332 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 FNDC11Q9BVV2 318 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 EXD2Q9NVH0 621 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 RBM47A0AV96 593 aaKnown RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 LRRC14BA6NHZ5 514 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 KPNA4O00629 521 aaPredicted RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 ANPEPP15144 967 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 BMP7P18075 431 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 USP4Q13107 963 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 RFTN1Q14699 578 aaPredicted RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 HMCESQ96FZ2 354 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 IKZF3Q9UKT9 509 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 UNGP13051 313 aaPredicted RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 PNLIPRP1P54315 467 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 TDRPQ86YL5 185 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 AP2M1Q96CW1 435 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 DUS2Q9NX74 493 aaKnown RBP18.9■□□□□ 0.62
PTPRE-201ENST00000254667 IGSF9Q9P2J2 1179 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 PCDHGB3Q9Y5G1 929 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 LYVE1Q9Y5Y7 322 aa18.9■□□□□ 0.62
PTPRE-201ENST00000254667 CCNYL3P0C7X3 344 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 XIAPP98170 497 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 GAD2Q05329 585 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 PPIDQ08752 370 aaKnown RBP18.89■□□□□ 0.62
PTPRE-201ENST00000254667 GALNT18Q6P9A2 607 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 SCAIQ8N9R8 606 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 SLC22A17Q8WUG5 538 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 MCRS1Q96EZ8 462 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 HAPLN3Q96S86 360 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 HEPHQ9BQS7 1158 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 LRTM1Q9HBL6 345 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 C8orf4Q9NR00 106 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 MIOSQ9NXC5 875 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 ZNF490Q9ULM2 529 aaPredicted RBP18.89■□□□□ 0.62
PTPRE-201ENST00000254667 CPQQ9Y646 472 aa18.89■□□□□ 0.62
PTPRE-201ENST00000254667 STBD1O95210 358 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 EPHX1P07099 455 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 CSNK2BP67870 215 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 ARHGAP1Q07960 439 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 ERICH5Q6P6B1 374 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 ARHGAP36Q6ZRI8 547 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 FAM220AQ7Z4H9 259 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 NTAN1Q96AB6 310 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 LENG1Q96BZ8 264 aaPredicted RBP18.89■□□□□ 0.61
PTPRE-201ENST00000254667 GPR21Q99679 349 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 RHOBTB2Q9BYZ6 727 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 LGALS13Q9UHV8 139 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 SAMD4AQ9UPU9 718 aaKnown RBP18.89■□□□□ 0.61
PTPRE-201ENST00000254667 PCDHGA4Q9Y5G9 962 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 COLEC10Q9Y6Z7 277 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 A0A0J9YYE9 177 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 TCRBV7S2A1N4TA0A589 114 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 PRAMEF1O95521 474 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 TPP2P29144 1249 aaPredicted RBP18.89■□□□□ 0.61
PTPRE-201ENST00000254667 TIGD2Q4W5G0 525 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 SFRP1Q8N474 314 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 TBATAQ96M53 351 aa18.89■□□□□ 0.61
PTPRE-201ENST00000254667 GAS2L1Q99501 681 aaPredicted RBP18.89■□□□□ 0.61
PTPRE-201ENST00000254667 SPRTNQ9H040 489 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms