RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TBC1D3LB9A6J9 549 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 H0Y8X5 98 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 AP3B1O00203 1094 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 LATO43561 262 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 CER1O95813 267 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 TBC1D3HP0C7X1 549 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 ZNF883P0CG24 379 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 SERPINH1P50454 418 aaKnown RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 SLC18A2Q05940 514 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 NIPAL4Q0D2K0 466 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 NAB1Q13506 487 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 OLIG2Q13516 323 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 FRG1Q14331 258 aaKnown RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 PRAMEF14Q5SWL7 426 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 PIP5KL1Q5T9C9 394 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 TBC1D3GQ6DHY5 549 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 TBC1D3CQ6IPX1 549 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 CASC4Q6P4E1 433 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 MARK2Q7KZI7 788 aaKnown RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 CPLX4Q7Z7G2 160 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 DSG4Q86SJ6 1040 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 SPATS2Q86XZ4 545 aaKnown RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 LRRC34Q8IZ02 419 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 TBC1D3Q8IZP1 549 aaPredicted RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 BANPQ8N9N5 519 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 VOPP1Q96AW1 172 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 ARRDC3Q96B67 414 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 MAGEB18Q96M61 343 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 PIH1D1Q9NWS0 290 aaKnown RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 IPO11Q9UI26 975 aaKnown RBP17.4■□□□□ 0.38
HOXC6-201ENST00000243108 PCOLCE2Q9UKZ9 415 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 BTBD3Q9Y2F9 522 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 ZFHX4Q86UP3 3567 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 CFAP47Q6ZTR5 3102 aa17.4■□□□□ 0.38
HOXC6-201ENST00000243108 KRT37O76014 449 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 ZWINTO95229 277 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 PEX11BO96011 259 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 MT-ND3P03897 115 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 SNRPAP09012 282 aaKnown RBP17.39■□□□□ 0.37
HOXC6-201ENST00000243108 CA4P22748 312 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 RPA3P35244 121 aaPredicted RBP17.39■□□□□ 0.37
HOXC6-201ENST00000243108 NPY2RP49146 381 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 TEAD4Q15561 434 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 TRIP6Q15654 476 aaKnown RBP17.39■□□□□ 0.37
HOXC6-201ENST00000243108 SPANXN3Q5MJ09 141 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 FAM46CQ5VWP2 391 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 NAPEPLDQ6IQ20 393 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 DPY19L3Q6ZPD9 716 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 MLXIPLQ9NP71 852 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 BFARQ9NZS9 450 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 AAR2Q9Y312 384 aaKnown RBP17.39■□□□□ 0.37
HOXC6-201ENST00000243108 FCF1Q9Y324 198 aaKnown RBP17.39■□□□□ 0.37
HOXC6-201ENST00000243108 WASF2Q9Y6W5 498 aa17.39■□□□□ 0.37
HOXC6-201ENST00000243108 C1QTNF3-AMACRE9PGA6 284 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 VILLO15195 856 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 HYAL3O43820 417 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 USP12O75317 370 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 ANXA9O76027 345 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 POLBP06746 335 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 MAT2AP31153 395 aaKnown RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SERPINB9P50453 376 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 IL9RQ01113 521 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 ZNF423Q2M1K9 1284 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 ARSIQ5FYB1 569 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 LGSNQ5TDP6 509 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 LINC00523Q86TU6 105 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 TMEM135Q86UB9 458 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 GDAP1Q8TB36 358 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 BAHD1Q8TBE0 780 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 GRIN3AQ8TCU5 1115 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 MTBPQ96DY7 904 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 HMCESQ96FZ2 354 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SERAC1Q96JX3 654 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SCNM1Q9BWG6 230 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 RETREG1Q9H6L5 497 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SAMD15Q9P1V8 674 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 TM9SF1O15321 606 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SLC7A4O43246 635 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 UGT1A9O60656 530 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 HLA-DQB2P05538 268 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 MAPKAPK2P49137 400 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 HNRNPDQ14103 355 aaKnown RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SLC1A5Q15758 541 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 RETSATQ6NUM9 610 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 RGS9BPQ6ZS82 235 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 CNPY4Q8N129 248 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 TMIEQ8NEW7 156 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SETD7Q8WTS6 366 aaKnown RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 SEC16BQ96JE7 1060 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 TMEM121BQ9BXQ6 578 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
HOXC6-201ENST00000243108 UGT1A7Q9HAW7 530 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 UGT1A10Q9HAW8 530 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 UGT1A8Q9HAW9 530 aa17.38■□□□□ 0.37
HOXC6-201ENST00000243108 PTPRBP23467 1997 aa17.37■□□□□ 0.37
HOXC6-201ENST00000243108 MAGEB16A2A368 324 aa17.37■□□□□ 0.37
HOXC6-201ENST00000243108 TCP11X1B4DZS4 312 aa17.37■□□□□ 0.37
HOXC6-201ENST00000243108 TRIM49D1C9J1S8 452 aa17.37■□□□□ 0.37
HOXC6-201ENST00000243108 KPNA3O00505 521 aaPredicted RBP17.37■□□□□ 0.37
HOXC6-201ENST00000243108 LEFTY1O75610 366 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms