RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FGD2Q7Z6J4 655 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CUZD1Q86UP6 607 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 OR8K5Q8NH50 307 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 STOX2Q9P2F5 926 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 ARHGAP23Q9P227 1491 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 FAM95CA0A1B0GW59 222 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 M0R233 179 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 PGK2P07205 417 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 DHRS4L1P0CG22 281 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 ERVK-8P63133 956 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CRADDP78560 199 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 PRKCEQ02156 737 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 DBPQ10586 325 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CAMK1Q14012 370 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 MPP7Q5T2T1 576 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CPNE9Q8IYJ1 553 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CPSF7Q8N684 471 aaKnown RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 OR5K1Q8NHB7 308 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 PHF10Q8WUB8 498 aaKnown RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 NAA50Q9GZZ1 169 aaKnown RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 SNNO75324 88 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CSH1P0DML2 217 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CSH2P0DML3 217 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 HGFP14210 728 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 CDKN2BP42772 138 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 RPL6Q02878 288 aaKnown RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 SPATS1Q496A3 300 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 RHOXF1Q8NHV9 184 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 TESCQ96BS2 214 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 ZNRF3Q9ULT6 936 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 C10orf71Q711Q0 1435 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 MROH1Q8NDA8 1641 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 HMGCRP04035 888 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-201ENST00000236192 SLC26A2P50443 739 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 TMEM198Q66K66 360 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 SLC34A3Q8N130 599 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 PEX13Q92968 403 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 ATP13A2Q9NQ11 1180 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 PCDHGB6Q9Y5F9 930 aa12.84□□□□□ -0.35
VAMP4-201ENST00000236192 TGFB1I1O43294 461 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 CASP7P55210 303 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 MAD2L1Q13257 205 aaPredicted RBP12.83□□□□□ -0.35
VAMP4-201ENST00000236192 PGM2L1Q6PCE3 622 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 IPMKQ8NFU5 416 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 OMDQ99983 421 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 AASSQ9UDR5 926 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 RPS6KA6Q9UK32 745 aa12.83□□□□□ -0.35
VAMP4-201ENST00000236192 UBQLN1Q9UMX0 589 aaKnown RBP12.83□□□□□ -0.35
VAMP4-201ENST00000236192 KCNK1O00180 336 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TPSB2P20231 275 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 CES1P23141 567 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 RGS7P49802 495 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 PLK1P53350 603 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 DCDC1P59894 354 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SPCS2Q15005 226 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TPSAB1Q15661 275 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 LACC1Q8IV20 430 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TMEM132CQ8N3T6 1108 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 NDNFQ8TB73 568 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SETD6Q8TBK2 473 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TRIM54Q9BYV2 358 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 DPY30Q9C005 99 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 XKR8Q9H6D3 395 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 OLAHQ9NV23 265 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SLC39A1Q9NY26 324 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 RAB23Q9ULC3 237 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 U3KQV3 271 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF335Q9H4Z2 1342 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 C2P06681 752 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 EVI2BP34910 448 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF81P51508 661 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 NOMO3P69849 1222 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 CHRNEQ04844 493 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 GALNT1Q10472 559 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ATP6AP1Q15904 470 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SLC41A1Q8IVJ1 513 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SLC44A2Q8IWA5 706 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ASIC4Q96FT7 647 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SLC29A1Q99808 456 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SARS2Q9NP81 518 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 IL37Q9NZH6 218 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 NDUFAF4Q9P032 175 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 KLQ9UEF7 1012 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 NOCTQ9UK39 431 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 SAMHD1Q9Y3Z3 626 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 AGAP5A6NIR3 686 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms