RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TSPAN33Q86UF1 283 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 SLC25A41Q8N5S1 370 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 MAGOHBQ96A72 148 aaKnown RBP11.25□□□□□ -0.61
SF3B6-201ENST00000233468 TBL1YQ9BQ87 522 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 APOOQ9BUR5 198 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 FICDQ9BVA6 458 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 FAM83DQ9H4H8 585 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 IL21RQ9HBE5 538 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 MBNL1Q9NR56 388 aaKnown RBP11.25□□□□□ -0.61
SF3B6-201ENST00000233468 GPR27Q9NS67 375 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 PKP3Q9Y446 797 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 ZNF711Q9Y462 761 aa11.25□□□□□ -0.61
SF3B6-201ENST00000233468 NYNRINQ9P2P1 1898 aaKnown RBP11.25□□□□□ -0.61
SF3B6-201ENST00000233468 IGSF10Q6WRI0 2623 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 F5H423 210 aaPredicted RBP11.24□□□□□ -0.61
SF3B6-201ENST00000233468 TNFRSF10CO14798 259 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 CRTAMO95727 393 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 TUBB4AP04350 444 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 ATXN1LP0C7T5 689 aaKnown RBP11.24□□□□□ -0.61
SF3B6-201ENST00000233468 ALPPL2P10696 532 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 CASQ1P31415 396 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 HMGCLP35914 325 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 TRIM23P36406 574 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 GRK6P43250 576 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 SPINT3P49223 89 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 GDF10P55107 478 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 KIAA1024LP59773 190 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 PPARDQ03181 441 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 SIX1Q15475 284 aaPredicted RBP11.24□□□□□ -0.61
SF3B6-201ENST00000233468 TRIP6Q15654 476 aaKnown RBP11.24□□□□□ -0.61
SF3B6-201ENST00000233468 PDPK2PQ6A1A2 396 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 RANBP10Q6VN20 620 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 LYSMD3Q7Z3D4 306 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 GLT6D1Q7Z4J2 308 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 SLCO6A1Q86UG4 719 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 SPATS2Q86XZ4 545 aaKnown RBP11.24□□□□□ -0.61
SF3B6-201ENST00000233468 KLHDC8BQ8IXV7 354 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 BLOC1S5Q8TDH9 187 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 TBATAQ96M53 351 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 WDR92Q96MX6 357 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 RUNDC3BQ96NL0 473 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 CDC6Q99741 560 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 ZSCAN5AQ9BUG6 496 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 SLC13A1Q9BZW2 595 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 DNAJC28Q9NX36 388 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 SHOC2Q9UQ13 582 aa11.24□□□□□ -0.61
SF3B6-201ENST00000233468 FNDC3AQ9Y2H6 1198 aaKnown RBP11.24□□□□□ -0.61
SF3B6-201ENST00000233468 ACACAQ13085 2346 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 FAM221BA6H8Z2 402 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 STX7O15400 261 aaKnown RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 RASGRP1O95267 797 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 AP2A1O95782 977 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 AGTP01019 485 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 TNFP01375 233 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 CSF2P04141 144 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 C1SP09871 688 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 MYCLP1P12525 358 aaPredicted RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 NME1P15531 152 aaKnown RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 JUNDP17535 347 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 EPHA8P29322 1005 aaPredicted RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 ADRA1AP35348 466 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 FNTAP49354 379 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 DCDC1P59894 354 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 ETF1P62495 437 aaKnown RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 SARNPP82979 210 aaKnown RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 KCNC4Q03721 635 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 PEX6Q13608 980 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 FZD2Q14332 565 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 CDKN3Q16667 212 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 C19orf48Q6RUI8 117 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 ENPP7Q6UWV6 458 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 ADAMTSL4Q6UY14 1074 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 MARCH9Q86YJ5 346 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 NAXDQ8IW45 347 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 SDR16C5Q8N3Y7 309 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 DTX3LQ8TDB6 740 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 SAP25Q8TEE9 199 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 SETD7Q8WTS6 366 aaKnown RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 COG1Q8WTW3 980 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 MS4A14Q96JA4 679 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 PLEKHG4BQ96PX9 1271 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 C19orf43Q9BQ61 176 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 DUSP23Q9BVJ7 150 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 AP1M1Q9BXS5 423 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 TEX101Q9BY14 249 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 ABCG8Q9H221 673 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 ARNT2Q9HBZ2 717 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 NFKBIL1Q9UBC1 381 aaPredicted RBP11.23□□□□□ -0.61
SF3B6-201ENST00000233468 SPASTQ9UBP0 616 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 KLQ9UEF7 1012 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
SF3B6-201ENST00000233468 PLXNA2O75051 1894 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 PHF2O75151 1096 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms