RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CCDC167Q9P0B6 97 aa12.99□□□□□ -0.33
MSH2-201ENST00000233146 GGA1Q9UJY5 639 aa12.99□□□□□ -0.33
MSH2-201ENST00000233146 INTS6Q9UL03 887 aaKnown RBP12.99□□□□□ -0.33
MSH2-201ENST00000233146 TBC1D24Q9ULP9 559 aa12.99□□□□□ -0.33
MSH2-201ENST00000233146 SLIT2O94813 1529 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 A0A0B4J203 849 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ZNF623O75123 536 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ALPLP05186 524 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 HOXD4P09016 255 aaPredicted RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 MAGEA11P43364 429 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ARPP19P56211 112 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 UBE3AQ05086 875 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 CD47Q08722 323 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 FADDQ13158 208 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TTC23Q5W5X9 447 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TXNDC11Q6PKC3 985 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 FIP1L1Q6UN15 594 aaKnown RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 FNDC5Q8NAU1 212 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ZMIZ2Q8NF64 920 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TRAF4Q9BUZ4 470 aaPredicted RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 C6orf62Q9GZU0 229 aaPredicted RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 DCSTAMPQ9H295 470 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 FSHRP23945 695 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 CD6P30203 668 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 DAG1Q14118 895 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ZNF267Q14586 743 aaPredicted RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 CYP51A1Q16850 503 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 CLEC14AQ86T13 490 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 CARNMT1Q8N4J0 409 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TMEM199Q8N511 208 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 FBXW5Q969U6 566 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ROPN1LQ96C74 230 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 SDHCQ99643 169 aaPredicted RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 DNAI2Q9GZS0 605 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TOR3AQ9H497 397 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 C1orf112Q9NSG2 853 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 MKLN1Q9UL63 735 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TCRBV5S2A0A599 114 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 LINC01387J3KSC0 135 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ARPC2O15144 300 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 AKR7A2O43488 359 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 GNA15P30679 374 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 GP5P40197 560 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 GZMKP49863 264 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 CES5AQ6NT32 575 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 NIPA1Q7RTP0 329 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 TCTE3Q8IZS6 198 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 KDM1BQ8NB78 822 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 NCLNQ969V3 563 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 NXPE3Q969Y0 559 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 DPP3Q9NY33 737 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 NUFIP1Q9UHK0 495 aaKnown RBP12.98□□□□□ -0.33
MSH2-201ENST00000233146 HES2Q9Y543 173 aa12.98□□□□□ -0.33
MSH2-201ENST00000233146 OR6C70A6NIJ9 312 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 H0YC42 278 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 I3L521 148 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 CNTN5O94779 1100 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 MED26O95402 600 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 CYP3A4P08684 503 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 SHMT1P34896 483 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 RAP1GAPP47736 663 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 TPD52P55327 224 aaPredicted RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 PSMD5Q16401 504 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 PIK3R6Q5UE93 754 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 LIPMQ5VYY2 423 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 EFL1Q7Z2Z2 1120 aaKnown RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 OR10T2Q8NGX3 314 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 NSUN6Q8TEA1 469 aaKnown RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 SLC30A3Q99726 388 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 KAT8Q9H7Z6 458 aaKnown RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 FANCFQ9NPI8 374 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 FAM105AQ9NUU6 356 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 DDX60LQ5H9U9 1706 aaKnown RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 LRCH4O75427 683 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 CALB1P05937 261 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 ARHGDIAP52565 204 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 SNRPFP62306 86 aaKnown RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 BAMBIQ13145 260 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 TAF12Q16514 161 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 RAP1GAP2Q684P5 730 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 BRAT1Q6PJG6 821 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 OR2A14Q96R47 310 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 NMRAL1Q9HBL8 299 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 MTMR4Q9NYA4 1195 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms