RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 KCTD15Q96SI1 283 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-201ENST00000219334 SLC38A3Q99624 504 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 PAIP2BQ9ULR5 123 aaKnown RBP18.9■□□□□ 0.62
SMPD3-201ENST00000219334 SESN1Q9Y6P5 492 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 FPGTO14772 594 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 DGUOKQ16854 277 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 SPESP1Q6UW49 350 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 TEX47Q8TBZ9 253 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 NMD3Q96D46 503 aaKnown RBP18.9■□□□□ 0.62
SMPD3-201ENST00000219334 EFR3BQ9Y2G0 817 aa18.9■□□□□ 0.62
SMPD3-201ENST00000219334 BCL9LQ86UU0 1499 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 ALOX15BO15296 676 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 MFSD11O43934 449 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 BLKP51451 505 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 BNIP2Q12982 314 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 CFAP206Q8IYR0 622 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 OR7D4Q8NG98 312 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 OR10H5Q8NGA6 315 aa18.89■□□□□ 0.62
SMPD3-201ENST00000219334 RP9Q8TA86 221 aaKnown RBP18.89■□□□□ 0.62
SMPD3-201ENST00000219334 DDX18Q9NVP1 670 aaKnown RBP18.89■□□□□ 0.62
SMPD3-201ENST00000219334 POLR3HQ9Y535 204 aaPredicted RBP18.89■□□□□ 0.62
SMPD3-201ENST00000219334 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 C22orf31O95567 290 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 TRBC1P01850 177 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 SPIBQ01892 262 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 TRPS1Q9UHF7 1281 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 IKZF3Q9UKT9 509 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 SPATA2Q9UM82 520 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 GMPPBQ9Y5P6 360 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 MFN2O95140 757 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 ATP6V1G2O95670 118 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 UGT1A5P35504 534 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 TAS2R41P59536 307 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 HECTD2Q5U5R9 776 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 TEFMQ96QE5 360 aaKnown RBP18.89■□□□□ 0.61
SMPD3-201ENST00000219334 CLEC4MQ9H2X3 399 aaPredicted RBP18.89■□□□□ 0.61
SMPD3-201ENST00000219334 MCM8Q9UJA3 840 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 ZNF214Q9UL59 606 aaPredicted RBP18.89■□□□□ 0.61
SMPD3-201ENST00000219334 ASB3Q9Y575 518 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 L1CAMP32004 1257 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 PSMD4P55036 377 aaKnown RBP18.89■□□□□ 0.61
SMPD3-201ENST00000219334 NAE1Q13564 534 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 LPIN1Q14693 890 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 XKR4Q5GH76 650 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 MZT2AQ6P582 158 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 ARHGAP36Q6ZRI8 547 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 ENKURQ8TC29 256 aa18.89■□□□□ 0.61
SMPD3-201ENST00000219334 A0A087WXM4 84 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 SUV39H1O43463 412 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 PRAMEF1O95521 474 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 TMC5Q6UXY8 1006 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 FNIP1Q8TF40 1166 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 ABI3Q9P2A4 366 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 OR2AG2A6NM03 316 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 STK16O75716 305 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 PBX3P40426 434 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 ZNF132P52740 706 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 DSC2Q02487 901 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 CCDC92Q53HC0 331 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-201ENST00000219334 NECTIN3Q9NQS3 549 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 PTGFRNQ9P2B2 879 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 MATN4O95460 622 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 LAPTM5Q13571 262 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 TPGS2Q68CL5 300 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 ST6GALNAC4Q9H4F1 302 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 TRAF6Q9Y4K3 522 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 INSL6Q9Y581 213 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 INSIG1O15503 277 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 SLC22A3O75751 556 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 IFNGP01579 166 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 NT5EP21589 574 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 EML3Q32P44 896 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 HID1Q8IV36 788 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 SLC25A51Q9H1U9 297 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 CAB39LQ9H9S4 337 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 CLDND1Q9NY35 253 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 MTRRQ9UBK8 725 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 CD84Q9UIB8 345 aa18.88■□□□□ 0.61
SMPD3-201ENST00000219334 ARVCFO00192 962 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 SHBGP04278 402 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TPSB2P20231 275 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TPSAB1Q15661 275 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 BTN2A1Q7KYR7 527 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 CMC1Q7Z7K0 106 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TAC4Q86UU9 113 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TSEN2Q8NCE0 465 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 WFIKKN2Q8TEU8 576 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 APOLD1Q96LR9 279 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ANKRD27Q96NW4 1050 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 EQTNQ9NQ60 294 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 ZNF490Q9ULM2 529 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 SAMHD1Q9Y3Z3 626 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 TRIM38O00635 465 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 SLC35G6P0C7Q6 338 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 MAT2AP31153 395 aaKnown RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 GNPDA1P46926 289 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 GALNT18Q6P9A2 607 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 CLVS1Q8IUQ0 354 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-201ENST00000219334 GINS4Q9BRT9 223 aa18.87■□□□□ 0.61
SMPD3-201ENST00000219334 NUAK2Q9H093 628 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms