RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 INTS10Q9NVR2 710 aaKnown RBP13.27□□□□□ -0.29
SRP54-201ENST00000216774 POLG2Q9UHN1 485 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 PCDHA9Q9Y5H5 950 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 PTGDR2Q9Y5Y4 395 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 GMEB1Q9Y692 573 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 CCDC162PA2VCL2 907 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 H3BMM5 538 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 PPP6CO00743 305 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 ARPC2O15144 300 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 CLASP2O75122 1294 aaKnown RBP13.26□□□□□ -0.29
SRP54-201ENST00000216774 ITGB1P05556 798 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 CCT8P50990 548 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 STC1P52823 247 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 FKBP1BP68106 108 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 MERTKQ12866 999 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 SERINC3Q13530 473 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 ATP6AP1Q15904 470 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 TYSND1Q2T9J0 566 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
SRP54-201ENST00000216774 FAM219BQ5XKK7 198 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 TTC33Q6PID6 262 aaPredicted RBP13.26□□□□□ -0.29
SRP54-201ENST00000216774 DHRS4L2Q6PKH6 230 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 SPRED1Q7Z699 444 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 ZNF354CQ86Y25 554 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 ADGRG5Q8IZF4 528 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 ATP6V0D2Q8N8Y2 350 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 OR4L1Q8NH43 312 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 STAG3L4Q8TBR4 150 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 FAM110BQ8TC76 370 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 BRSK1Q8TDC3 778 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 DERL2Q9GZP9 239 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 SYTL2Q9HCH5 934 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 PADI3Q9ULW8 664 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 GPR45Q9Y5Y3 372 aa13.26□□□□□ -0.29
SRP54-201ENST00000216774 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 A0A1W2PP18 115 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 TYW5A2RUC4 315 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 MGEA5O60502 916 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 RAMP2O60895 175 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 RASAL1O95294 804 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 IGHA2P01877 340 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 CLCQ05315 142 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 RCAN2Q14206 197 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 DSC3Q14574 896 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 LPIN1Q14693 890 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 POLD3Q15054 466 aaPredicted RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 SLC36A3Q495N2 470 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 ZBED5Q49AG3 693 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 TMTC4Q5T4D3 741 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 EFL1Q7Z2Z2 1120 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 GPR141Q7Z602 305 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 PTRH1Q86Y79 214 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 EGFL6Q8IUX8 553 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 BLOC1S5Q8TDH9 187 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 DIS3LQ8TF46 1054 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 C8orf48Q96LL4 319 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 NSUN5Q96P11 429 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 SEMA3CQ99985 751 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 PREBQ9HCU5 417 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 GALNT8Q9NY28 637 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 EGFL7Q9UHF1 273 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 ARL5AQ9Y689 179 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 DOCK4Q8N1I0 1966 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 MYADML2A6NDP7 307 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 LRRC14BA6NHZ5 514 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 DRGXA6NNA5 263 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 DUSP11O75319 330 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 LINC00032P0C843 101 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 PRR35P0CG20 571 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 AKR1A1P14550 325 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 CD52P31358 61 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 NUP107P57740 925 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 YBEYP58557 167 aaPredicted RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 SEMA3AQ14563 771 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 FBXL22Q6P050 247 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 CMTR2Q8IYT2 770 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 FBXO39Q8N4B4 442 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 SEPT8Q92599 483 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 FUBP3Q96I24 572 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRP54-201ENST00000216774 KCNA7Q96RP8 456 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 ABI2Q9NYB9 513 aaPredicted RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 GIMAP2Q9UG22 337 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
SRP54-201ENST00000216774 PLXNA3P51805 1871 aa13.25□□□□□ -0.29
SRP54-201ENST00000216774 RNF103-CHMP3A0A140T963 221 aa13.24□□□□□ -0.29
SRP54-201ENST00000216774 LCHNA4D1U4 455 aa13.24□□□□□ -0.29
SRP54-201ENST00000216774 MOXD2PA6NHM9 499 aa13.24□□□□□ -0.29
SRP54-201ENST00000216774 SYCE1LA8MT33 242 aa13.24□□□□□ -0.29
SRP54-201ENST00000216774 GNAO1P09471 354 aa13.24□□□□□ -0.29
SRP54-201ENST00000216774 UMPSP11172 480 aa13.24□□□□□ -0.29
SRP54-201ENST00000216774 EEF1DP29692 281 aaKnown RBP13.24□□□□□ -0.29
SRP54-201ENST00000216774 ETFBP38117 255 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms