RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 PAGE3Q5JUK9 113 aa15.79■□□□□ 0.12
SNAPC1-201ENST00000216294 METTL23Q86XA0 190 aa15.79■□□□□ 0.12
SNAPC1-201ENST00000216294 MAGEE2Q8TD90 523 aaPredicted RBP15.79■□□□□ 0.12
SNAPC1-201ENST00000216294 LINC01599Q8WXQ3 324 aa15.79■□□□□ 0.12
SNAPC1-201ENST00000216294 SGCDQ92629 289 aa15.79■□□□□ 0.12
SNAPC1-201ENST00000216294 PNPLA3Q9NST1 481 aa15.79■□□□□ 0.12
SNAPC1-201ENST00000216294 MYO16Q9Y6X6 1858 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 DOCK4Q8N1I0 1966 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 MUSKO15146 869 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 GOT2P00505 430 aaKnown RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 PENKP01210 267 aaPredicted RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 GFAPP14136 432 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 PSMD7P51665 324 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 PPP1R8Q12972 351 aaKnown RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 PMS2P3Q13401 168 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 C16orf72Q14CZ0 275 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 GPR107Q5VW38 600 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 UGT3A1Q6NUS8 523 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 C8orf82Q6P1X6 216 aaPredicted RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 TRAF7Q6Q0C0 670 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ERMP1Q7Z2K6 904 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ZNF280BQ86YH2 543 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 TTC9BQ8N6N2 239 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 C12orf43Q96C57 262 aaKnown RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ERLEC1Q96DZ1 483 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 CDK15Q96Q40 435 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 CLK4Q9HAZ1 481 aaKnown RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 CSNK1G1Q9HCP0 422 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 CREBZFQ9NS37 354 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ABI2Q9NYB9 513 aaPredicted RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ASB1Q9Y576 335 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 GPR39O43194 453 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 SNAP29O95721 258 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 IGLV3-25P01717 112 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 CD1DP15813 335 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 SLC6A2P23975 617 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 TNK2Q07912 1038 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 NEDD8Q15843 81 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 CYP51A1Q16850 503 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 OVOS1Q6IE37 1185 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 XKR5Q6UX68 686 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 RALGPS2Q86X27 583 aaPredicted RBP15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ISOC1Q96CN7 298 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 EXOC2Q96KP1 924 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 TCF12Q99081 682 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ACBD6Q9BR61 282 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ADI1Q9BV57 179 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 RRN3Q9NYV6 651 aa15.78■□□□□ 0.12
SNAPC1-201ENST00000216294 ANGPT2O15123 496 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 ARPC2O15144 300 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 CYP11A1P05108 521 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 INHAP05111 366 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 PCNAP12004 261 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 MTHFD2P13995 350 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 ACVRL1P37023 503 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 PSMD8P48556 350 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 CDK9P50750 372 aaKnown RBP15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 DCTN2Q13561 401 aaKnown RBP15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 RPS6KA2Q15349 733 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 MAPRE2Q15555 327 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 OTUD3Q5T2D3 398 aaPredicted RBP15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 MANEALQ5VSG8 457 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 PPP4R4Q6NUP7 873 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 FAM171BQ6P995 826 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 IGSF8Q969P0 613 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 ANKRD60Q9BZ19 345 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 INTS7Q9NVH2 962 aaKnown RBP15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 POLG2Q9UHN1 485 aa15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 CNOT11Q9UKZ1 510 aaKnown RBP15.77■□□□□ 0.12
SNAPC1-201ENST00000216294 A0A1W2PPW3 197 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 A0A1W2PQY0 241 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 CCDC162PA2VCL2 907 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 ASPDHA6ND91 283 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 M0QZQ0 153 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 PSMD3O43242 534 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 RBP1P09455 135 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 NR4A1P22736 598 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 UFM1P61960 85 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 HERVK_113P63132 956 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 CLLU1OSQ5K130 101 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 ANKRD34AQ69YU3 496 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 ELMSAN1Q6PJG2 1045 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 TMEM26Q6ZUK4 368 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 RTL3Q8N8U3 475 aaKnown RBP15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 PKMYT1Q99640 499 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 HAUS8Q9BT25 410 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 ERVK-6Q9BXR3 956 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 CATSPERBQ9H7T0 1116 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 VPS45Q9NRW7 570 aa15.77■□□□□ 0.11
SNAPC1-201ENST00000216294 CDC7O00311 574 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 LDB2O43679 373 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 HOXD10P28358 340 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 EEF1DP29692 281 aaKnown RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 FMO4P31512 558 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 EFEMP1Q12805 493 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 TRAP1Q12931 704 aaKnown RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 EIF4EBP2Q13542 120 aaPredicted RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 FGD3Q5JSP0 725 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 MARC1Q5VT66 337 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms