RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SGF29Q96ES7 293 aa15.79■□□□□ 0.12
ERCC1-201ENST00000013807 OR2M4Q96R27 311 aa15.79■□□□□ 0.12
ERCC1-201ENST00000013807 RDH14Q9HBH5 336 aa15.79■□□□□ 0.12
ERCC1-201ENST00000013807 RBM22Q9NW64 420 aaKnown RBP eCLIP15.79■□□□□ 0.12
ERCC1-201ENST00000013807 SEPT10Q9P0V9 454 aa15.79■□□□□ 0.12
ERCC1-201ENST00000013807 IGHV1OR21-1A0A087WYE8 117 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 A0A0U1RQS6 177 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 RGSL1A5PLK6 1076 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 KRT7P08729 469 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 CA4P22748 312 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 ALDH4A1P30038 563 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 MAN1A1P33908 653 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 GPLD1P80108 840 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 DSC2Q02487 901 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 ITKQ08881 620 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 SLC10A2Q12908 348 aaPredicted RBP15.78■□□□□ 0.12
ERCC1-201ENST00000013807 NFKBIBQ15653 356 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 SLC18A3Q16572 532 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 MAP9Q49MG5 647 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 TMEM164Q5U3C3 297 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 SFRP1Q8N474 314 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 KCTD6Q8NC69 237 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 CPLX3Q8WVH0 158 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 PATE1Q8WXA2 126 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 WDR24Q96S15 920 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 NUDT22Q9BRQ3 303 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 FOXJ2Q9P0K8 574 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 AKAP7Q9P0M2 348 aaPredicted RBP15.78■□□□□ 0.12
ERCC1-201ENST00000013807 CNOT6Q9ULM6 557 aaKnown RBP15.78■□□□□ 0.12
ERCC1-201ENST00000013807 CHKBQ9Y259 395 aa15.78■□□□□ 0.12
ERCC1-201ENST00000013807 SYCE3A1L190 88 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 ANKRD66B4E2M5 251 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 DNAJC6O75061 913 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 H2AFZP0C0S5 128 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 ACTR1BP42025 376 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 ARSDP51689 593 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 EPHB1P54762 984 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 TAS2R40P59535 323 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 ACTR1AP61163 376 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 NIPAL4Q0D2K0 466 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 LINC00303Q3SY05 128 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.77■□□□□ 0.12
ERCC1-201ENST00000013807 PHF19Q5T6S3 580 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 HENMT1Q5T8I9 393 aaKnown RBP15.77■□□□□ 0.12
ERCC1-201ENST00000013807 USP53Q70EK8 1073 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 H2AFVQ71UI9 128 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 SMIM14Q96QK8 99 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 TAAR9Q96RI9 348 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 AGAP2Q99490 1192 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 RMI1Q9H9A7 625 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 PCDH9Q9HC56 1237 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 DTLQ9NZJ0 730 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 CD84Q9UIB8 345 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 TMEM98Q9Y2Y6 226 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 PLEKHM1Q9Y4G2 1056 aa15.77■□□□□ 0.12
ERCC1-201ENST00000013807 GOLGA6CA6NDK9 693 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 GOLGA6BA6NDN3 693 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 J3QKU1 62 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 CLDN7O95471 211 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 HLA-DQB2P05538 268 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 MMP2P08253 660 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 GOLGA6DP0CG33 693 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 THRAP10827 490 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 FGF3P11487 239 aaPredicted RBP15.76■□□□□ 0.11
ERCC1-201ENST00000013807 CCL4P13236 92 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 KDELR1P24390 212 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 CASP14P31944 242 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 SPINT3P49223 89 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 MAPK10P53779 464 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 GBE1Q04446 702 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 PPIDQ08752 370 aaKnown RBP15.76■□□□□ 0.11
ERCC1-201ENST00000013807 AMZ1Q400G9 498 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 TMEM71Q6P5X7 295 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 ZFAND4Q86XD8 727 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 CPNE8Q86YQ8 564 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 EXD3Q8N9H8 876 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 RNF157Q96PX1 679 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 RIOK2Q9BVS4 552 aaKnown RBP15.76■□□□□ 0.11
ERCC1-201ENST00000013807 GOLGA6AQ9NYA3 693 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 CTTNBP2NLQ9P2B4 639 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 PCDHB11Q9Y5F2 797 aa15.76■□□□□ 0.11
ERCC1-201ENST00000013807 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■□□□□ 10.8
ERCC1-201ENST00000013807 SSU72P8A0A1W2PR75 194 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 B4E171 279 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 STMND1H3BQB6 276 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 CSF2RBP32927 897 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 TSPAN7P41732 249 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
ERCC1-201ENST00000013807 CLCNKAP51800 687 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 IFI35P80217 286 aaPredicted RBP15.75■□□□□ 0.11
ERCC1-201ENST00000013807 QPCTQ16769 361 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 MANEAQ5SRI9 462 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 WDR74Q6RFH5 385 aaPredicted RBP15.75■□□□□ 0.11
ERCC1-201ENST00000013807 GALNT13Q8IUC8 556 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 CNTD1Q8N815 330 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 AGBL5Q8NDL9 886 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 CTNNBL1Q8WYA6 563 aaPredicted RBP15.75■□□□□ 0.11
ERCC1-201ENST00000013807 CCDC74BQ96LY2 380 aa15.75■□□□□ 0.11
ERCC1-201ENST00000013807 DNAJC7Q99615 494 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms